Details for: CLSTN1
Associated with
Cells (max top 100)
(Marker Scores and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: inhibitory interneuron (CL0000498)
Fold Change: 3.23
Marker Score: 14,922 - Cell Name: basal cell of epithelium of trachea (CL1000348)
Fold Change: 2.61
Marker Score: 19,455 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: 2.49
Marker Score: 49,454 - Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
Fold Change: 2.39
Marker Score: 35,753 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 2.36
Marker Score: 9,873 - Cell Name: rod bipolar cell (CL0000751)
Fold Change: 2.34
Marker Score: 1,220 - Cell Name: GABAergic amacrine cell (CL4030027)
Fold Change: 2.28
Marker Score: 4,627 - Cell Name: vip GABAergic cortical interneuron (CL4023016)
Fold Change: 2.25
Marker Score: 85,398 - Cell Name: sncg GABAergic cortical interneuron (CL4023015)
Fold Change: 2.22
Marker Score: 17,052 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: 2.22
Marker Score: 81,946 - Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
Fold Change: 2.19
Marker Score: 9,059 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 2.07
Marker Score: 2,785 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
Fold Change: 2.05
Marker Score: 19,267 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 2.03
Marker Score: 2,135 - Cell Name: caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 2.03
Marker Score: 7,832 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 2.02
Marker Score: 123,984 - Cell Name: GABAergic neuron (CL0000617)
Fold Change: 2
Marker Score: 8,338 - Cell Name: photoreceptor cell (CL0000210)
Fold Change: 2
Marker Score: 1,502 - Cell Name: kidney loop of Henle thin ascending limb epithelial cell (CL1001107)
Fold Change: 1.95
Marker Score: 1,978 - Cell Name: corneal epithelial cell (CL0000575)
Fold Change: 1.92
Marker Score: 2,121 - Cell Name: astrocyte of the cerebral cortex (CL0002605)
Fold Change: 1.91
Marker Score: 40,752 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: 1.88
Marker Score: 17,845 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 1.88
Marker Score: 2,127 - Cell Name: kidney loop of Henle thick ascending limb epithelial cell (CL1001106)
Fold Change: 1.88
Marker Score: 5,032 - Cell Name: neural progenitor cell (CL0011020)
Fold Change: 1.87
Marker Score: 7,245 - Cell Name: stellate neuron (CL0000122)
Fold Change: 1.86
Marker Score: 10,009 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: 1.86
Marker Score: 19,239 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: 1.86
Marker Score: 588 - Cell Name: neuron associated cell (sensu Vertebrata) (CL0000123)
Fold Change: 1.85
Marker Score: 9,704 - Cell Name: ciliated columnar cell of tracheobronchial tree (CL0002145)
Fold Change: 1.84
Marker Score: 15,946 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 1.83
Marker Score: 535 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: 1.82
Marker Score: 15,672 - Cell Name: acinar cell (CL0000622)
Fold Change: 1.82
Marker Score: 1,283 - Cell Name: ciliated cell (CL0000064)
Fold Change: 1.8
Marker Score: 6,180 - Cell Name: nasal mucosa goblet cell (CL0002480)
Fold Change: 1.79
Marker Score: 1,199 - Cell Name: basal cell (CL0000646)
Fold Change: 1.78
Marker Score: 2,302 - Cell Name: vascular leptomeningeal cell (CL4023051)
Fold Change: 1.78
Marker Score: 2,046 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: 1.76
Marker Score: 2,131 - Cell Name: pyramidal neuron (CL0000598)
Fold Change: 1.76
Marker Score: 2,953 - Cell Name: mature astrocyte (CL0002627)
Fold Change: 1.73
Marker Score: 1,139 - Cell Name: cortical thymic epithelial cell (CL0002364)
Fold Change: 1.71
Marker Score: 6,332 - Cell Name: glycinergic amacrine cell (CL4030028)
Fold Change: 1.67
Marker Score: 1,572 - Cell Name: kidney distal convoluted tubule epithelial cell (CL1000849)
Fold Change: 1.66
Marker Score: 1,757 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 1.64
Marker Score: 962 - Cell Name: granule cell (CL0000120)
Fold Change: 1.6
Marker Score: 12,100 - Cell Name: neuron (CL0000540)
Fold Change: 1.6
Marker Score: 6,502 - Cell Name: macroglial cell (CL0000126)
Fold Change: 1.59
Marker Score: 3,661 - Cell Name: OFF retinal ganglion cell (CL4023033)
Fold Change: 1.59
Marker Score: 667 - Cell Name: kidney loop of Henle thin descending limb epithelial cell (CL1001111)
Fold Change: 1.57
Marker Score: 1,698 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: 1.56
Marker Score: 2,410 - Cell Name: chromaffin cell (CL0000166)
Fold Change: 1.55
Marker Score: 2,175 - Cell Name: basal epithelial cell of prostatic duct (CL0002236)
Fold Change: 1.54
Marker Score: 1,366 - Cell Name: peripheral nervous system neuron (CL2000032)
Fold Change: 1.5
Marker Score: 1,684 - Cell Name: neuronal brush cell (CL0000555)
Fold Change: 1.5
Marker Score: 5,029 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: 1.48
Marker Score: 733 - Cell Name: epithelial cell of prostate (CL0002231)
Fold Change: 1.44
Marker Score: 1,000 - Cell Name: oligodendrocyte precursor cell (CL0002453)
Fold Change: 1.44
Marker Score: 1,780 - Cell Name: cerebral cortex neuron (CL0010012)
Fold Change: 1.43
Marker Score: 4,091 - Cell Name: kidney collecting duct principal cell (CL1001431)
Fold Change: 1.43
Marker Score: 3,613 - Cell Name: colon epithelial cell (CL0011108)
Fold Change: 1.43
Marker Score: 4,494 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 1.43
Marker Score: 426 - Cell Name: duct epithelial cell (CL0000068)
Fold Change: 1.42
Marker Score: 663 - Cell Name: multi-ciliated epithelial cell (CL0005012)
Fold Change: 1.41
Marker Score: 2,679 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 1.41
Marker Score: 1,701 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 1.4
Marker Score: 24,784 - Cell Name: kidney connecting tubule epithelial cell (CL1000768)
Fold Change: 1.35
Marker Score: 1,904 - Cell Name: mesangial cell (CL0000650)
Fold Change: 1.34
Marker Score: 1,619 - Cell Name: oligodendrocyte (CL0000128)
Fold Change: 1.33
Marker Score: 3,178 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 1.32
Marker Score: 2,890 - Cell Name: glandular cell of esophagus (CL0002657)
Fold Change: 1.31
Marker Score: 414 - Cell Name: corneal endothelial cell (CL0000132)
Fold Change: 1.3
Marker Score: 758 - Cell Name: intestine goblet cell (CL0019031)
Fold Change: 1.27
Marker Score: 1,222 - Cell Name: Mueller cell (CL0000636)
Fold Change: 1.27
Marker Score: 1,762 - Cell Name: granulosa cell (CL0000501)
Fold Change: 1.27
Marker Score: 12,773 - Cell Name: luminal cell of prostate epithelium (CL0002340)
Fold Change: 1.27
Marker Score: 737 - Cell Name: ON retinal ganglion cell (CL4023032)
Fold Change: 1.26
Marker Score: 343 - Cell Name: keratocyte (CL0002363)
Fold Change: 1.24
Marker Score: 286 - Cell Name: lung ciliated cell (CL1000271)
Fold Change: 1.22
Marker Score: 581 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 1.21
Marker Score: 2,748 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 1.2
Marker Score: 13,492 - Cell Name: mature microglial cell (CL0002629)
Fold Change: 1.18
Marker Score: 428 - Cell Name: cerebral cortex endothelial cell (CL1001602)
Fold Change: 1.18
Marker Score: 703 - Cell Name: A2 amacrine cell (CL0004219)
Fold Change: 1.17
Marker Score: 372 - Cell Name: renal interstitial pericyte (CL1001318)
Fold Change: 1.17
Marker Score: 1,117 - Cell Name: cerebellar granule cell precursor (CL0002362)
Fold Change: 1.16
Marker Score: 651 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: 1.16
Marker Score: 1,200 - Cell Name: choroid plexus epithelial cell (CL0000706)
Fold Change: 1.15
Marker Score: 1,057 - Cell Name: primary sensory neuron (sensu Teleostei) (CL0000531)
Fold Change: 1.15
Marker Score: 385 - Cell Name: retinal rod cell (CL0000604)
Fold Change: 1.14
Marker Score: 3,252 - Cell Name: astrocyte (CL0000127)
Fold Change: 1.13
Marker Score: 981 - Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
Fold Change: 1.13
Marker Score: 680 - Cell Name: epithelial cell of proximal tubule (CL0002306)
Fold Change: 1.12
Marker Score: 3,994 - Cell Name: respiratory goblet cell (CL0002370)
Fold Change: 1.12
Marker Score: 324 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: 1.12
Marker Score: 382 - Cell Name: pancreatic acinar cell (CL0002064)
Fold Change: 1.12
Marker Score: 2,357 - Cell Name: type EC enteroendocrine cell (CL0000577)
Fold Change: 1.11
Marker Score: 1,044 - Cell Name: interstitial cell of ovary (CL0002094)
Fold Change: 1.11
Marker Score: 7,197 - Cell Name: Leydig cell (CL0000178)
Fold Change: 1.11
Marker Score: 1,192 - Cell Name: adventitial cell (CL0002503)
Fold Change: 1.11
Marker Score: 273 - Cell Name: endocrine cell (CL0000163)
Fold Change: 1.09
Marker Score: 563
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 2804733456
Symbol: CSTN1_HUMAN
Name: Alzheimer-related cadherin-like protein
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 12972431
Title: Novel cadherin-related membrane proteins, Alcadeins, enhance the X11-like protein-mediated stabilization of amyloid beta-protein precursor metabolism.
PubMed ID: 12972431
PubMed ID: 10048485
Title: Prediction of the coding sequences of unidentified human genes. XII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.
PubMed ID: 10048485
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 16710414
Title: The DNA sequence and biological annotation of human chromosome 1.
PubMed ID: 16710414
DOI: 10.1038/nature04727
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 15037614
Title: Coordinated metabolism of Alcadein and amyloid beta-protein precursor regulates FE65-dependent gene transactivation.
PubMed ID: 15037614
PubMed ID: 12498782
Title: The calsyntenins - a family of postsynaptic membrane proteins with distinct neuronal expression patterns.
PubMed ID: 12498782
PubMed ID: 17332754
Title: The novel cargo Alcadein induces vesicle association of kinesin-1 motor components and activates axonal transport.
PubMed ID: 17332754
PubMed ID: 21385839
Title: Phosphorylation of kinesin light chain 1 at serine 460 modulates binding and trafficking of calsyntenin-1.
PubMed ID: 21385839
DOI: 10.1242/jcs.075168
Sequence Information:
- Length: 981
- Mass: 109793
- Checksum: 01856284DEC3FC73
- Sequence:
MLRRPAPALA PAARLLLAGL LCGGGVWAAR VNKHKPWLEP TYHGIVTEND NTVLLDPPLI ALDKDAPLRF AESFEVTVTK EGEICGFKIH GQNVPFDAVV VDKSTGEGVI RSKEKLDCEL QKDYSFTIQA YDCGKGPDGT NVKKSHKATV HIQVNDVNEY APVFKEKSYK ATVIEGKQYD SILRVEAVDA DCSPQFSQIC SYEIITPDVP FTVDKDGYIK NTEKLNYGKE HQYKLTVTAY DCGKKRATED VLVKISIKPT CTPGWQGWNN RIEYEPGTGA LAVFPNIHLE TCDEPVASVQ ATVELETSHI GKGCDRDTYS EKSLHRLCGA AAGTAELLPS PSGSLNWTMG LPTDNGHDSD QVFEFNGTQA VRIPDGVVSV SPKEPFTISV WMRHGPFGRK KETILCSSDK TDMNRHHYSL YVHGCRLIFL FRQDPSEEKK YRPAEFHWKL NQVCDEEWHH YVLNVEFPSV TLYVDGTSHE PFSVTEDYPL HPSKIETQLV VGACWQEFSG VENDNETEPV TVASAGGDLH MTQFFRGNLA GLTLRSGKLA DKKVIDCLYT CKEGLDLQVL EDSGRGVQIQ AHPSQLVLTL EGEDLGELDK AMQHISYLNS RQFPTPGIRR LKITSTIKCF NEATCISVPP VDGYVMVLQP EEPKISLSGV HHFARAASEF ESSEGVFLFP ELRIISTITR EVEPEGDGAE DPTVQESLVS EEIVHDLDTC EVTVEGEELN HEQESLEVDM ARLQQKGIEV SSSELGMTFT GVDTMASYEE VLHLLRYRNW HARSLLDRKF KLICSELNGR YISNEFKVEV NVIHTANPME HANHMAAQPQ FVHPEHRSFV DLSGHNLANP HPFAVVPSTA TVVIVVCVSF LVFMIILGVF RIRAAHRRTM RDQDTGKENE MDWDDSALTI TVNPMETYED QHSSEEEEEE EEEEESEDGE EEDDITSAES ESSEEEEGEQ GDPQNATRQQ QLEWDDSTLS Y
Genular Protein ID: 1996245198
Symbol: B4E3Q1_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Sequence Information:
- Length: 962
- Mass: 107816
- Checksum: 7BF0D0D723696E0F
- Sequence:
MLRRPAPALA PAARLLLAGL LCGGGVWAAR VNKHKPWLEP TYHGIVTEND NTVLLDPPLI ALDKDAPLRF AESFEVTVTK EGEICGFKIH GQNVPFDAVV VDKSTGEGVI RSKEKLDCEL QKDYSFTIQA YDCGKGPDGT NVKKSHKATV HIQVNDVNEY APVFKEKSYK ATVIEGKQYD SILRVEAVDA DCSPQFSQIC SYEIITPDVP FTVDKDGYIK NTEKLNYGKE HQYKLTVTAY DCGKKRATED VLVKISIKPT CTPGWQGWNN RIEYEPGTGA LAVFPNIHLE TCDEPVASVQ ATVELETSHI GKGCDRDTYS EKSLHRLCGA AAGTAELLPS PSGSLNWTMG LPTDNGHDSD QVFEFNGTQA VRIPDGVVSV SPKEPFTISV WMRHGPFGRK KETILCSSDK TDMNRHHYSL YVHGCRLIFL FRQDPSEEKK YRPAEFHWKL NQVCDEEWHH YVLNVEFPSV TLYVDGTSHE PFSVTEDYPL HPSKIETQLV VGACWQGGDL HMTQFFRGNL AGLTLRSGKL ADKKVIDCLY TCKEGLDLQV LEDSGRGVQI QAHPSQLVLT LEGEDLGELD KAMQHISYLN SRQFPTPGIR RLKITSTIKC FNEATCISVP PVDGYVMVLQ PEEPKISLSG VHHFARAASE FESSEGVFLF PELRIISTIT REVEPEGDGA EDPTVQESLV SEEIVHDLDT CEVTVEGEEL NHEQESLEVD MARLQQKGIE VSSSELGMTF TGVDTMASYE EVLHLLRYRN WHARSLLDRK FKLICSELNG RYISNEFKVE VNVIHTANPM EHANHMAAQP QFVHPEHRSF VDLSGHNLAN PHPFAVVPST ATVVIVVCVS FLVFMIILGV FRIRAAHRRT MRDQDTGKEN EMDWDDSALT ITVNPMETYE DQHSSEEEEE EEEEEESEDG EEEDDITSAE SESSEEEEGE QGDPQNATRQ QQLEWDDSTL SY
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.