Details for: RPH3A
Associated with
Cells (max top 100)
(Marker Scores and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: progenitor cell (CL0011026)
Fold Change: 4.72
Marker Score: 30,404 - Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
Fold Change: 2.72
Marker Score: 40,644 - Cell Name: sncg GABAergic cortical interneuron (CL4023015)
Fold Change: 2.68
Marker Score: 20,516 - Cell Name: epithelial cell of alveolus of lung (CL0010003)
Fold Change: 2.47
Marker Score: 1,106 - Cell Name: neuronal brush cell (CL0000555)
Fold Change: 2.45
Marker Score: 8,213 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: 2.37
Marker Score: 47,195 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
Fold Change: 2.11
Marker Score: 19,802 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: 1.8
Marker Score: 66,545 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: 1.8
Marker Score: 17,136 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 1.58
Marker Score: 97,149 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: 1.54
Marker Score: 15,917 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: 1.47
Marker Score: 12,597 - Cell Name: chromaffin cell (CL0000166)
Fold Change: 1.46
Marker Score: 2,055 - Cell Name: CNS interneuron (CL0000402)
Fold Change: 1.45
Marker Score: 696 - Cell Name: kidney proximal convoluted tubule epithelial cell (CL1000838)
Fold Change: 1.44
Marker Score: 2,971 - Cell Name: caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 1.43
Marker Score: 5,522 - Cell Name: immature innate lymphoid cell (CL0001082)
Fold Change: 1.34
Marker Score: 2,717 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: 1.33
Marker Score: 2,058 - Cell Name: cardiac endothelial cell (CL0010008)
Fold Change: 1.3
Marker Score: 2,466 - Cell Name: neuron (CL0000540)
Fold Change: 1.3
Marker Score: 5,281 - Cell Name: rod bipolar cell (CL0000751)
Fold Change: 1.29
Marker Score: 672 - Cell Name: vip GABAergic cortical interneuron (CL4023016)
Fold Change: 1.19
Marker Score: 45,009 - Cell Name: cerebral cortex neuron (CL0010012)
Fold Change: 1.03
Marker Score: 2,951 - Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
Fold Change: 1
Marker Score: 71,807 - Cell Name: forebrain radial glial cell (CL0013000)
Fold Change: 1
Marker Score: 48,032 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.99
Marker Score: 2,506 - Cell Name: absorptive cell (CL0000212)
Fold Change: 0.98
Marker Score: 30,406 - Cell Name: transit amplifying cell (CL0009010)
Fold Change: 0.94
Marker Score: 5,349 - Cell Name: abnormal cell (CL0001061)
Fold Change: 0.92
Marker Score: 2,742 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 0.9
Marker Score: 14,159 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.87
Marker Score: 5,284 - Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
Fold Change: 0.86
Marker Score: 517 - Cell Name: pyramidal neuron (CL0000598)
Fold Change: 0.85
Marker Score: 1,425 - Cell Name: goblet cell (CL0000160)
Fold Change: 0.83
Marker Score: 5,539 - Cell Name: CD14-positive monocyte (CL0001054)
Fold Change: 0.8
Marker Score: 2,002 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: 0.78
Marker Score: 1,264 - Cell Name: brush cell (CL0002204)
Fold Change: 0.77
Marker Score: 707 - Cell Name: Cajal-Retzius cell (CL0000695)
Fold Change: 0.76
Marker Score: 395 - Cell Name: mononuclear cell (CL0000842)
Fold Change: 0.75
Marker Score: 241 - Cell Name: GABAergic neuron (CL0000617)
Fold Change: 0.67
Marker Score: 2,805 - Cell Name: inhibitory interneuron (CL0000498)
Fold Change: 0.65
Marker Score: 3,007 - Cell Name: intestinal enteroendocrine cell (CL1001516)
Fold Change: 0.58
Marker Score: 461 - Cell Name: smooth muscle myoblast (CL0000514)
Fold Change: 0.54
Marker Score: 256 - Cell Name: GABAergic amacrine cell (CL4030027)
Fold Change: 0.52
Marker Score: 1,061 - Cell Name: A2 amacrine cell (CL0004219)
Fold Change: 0.51
Marker Score: 163 - Cell Name: oligodendrocyte precursor cell (CL0002453)
Fold Change: 0.5
Marker Score: 624 - Cell Name: mature astrocyte (CL0002627)
Fold Change: 0.49
Marker Score: 324 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 0.44
Marker Score: 171 - Cell Name: neuronal receptor cell (CL0000006)
Fold Change: 0.39
Marker Score: 171 - Cell Name: connective tissue cell (CL0002320)
Fold Change: 0.39
Marker Score: 100 - Cell Name: pancreatic D cell (CL0000173)
Fold Change: 0.38
Marker Score: 164 - Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
Fold Change: 0.37
Marker Score: 1,520 - Cell Name: kidney proximal straight tubule epithelial cell (CL1000839)
Fold Change: 0.37
Marker Score: 862 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: 0.34
Marker Score: 167 - Cell Name: blood vessel endothelial cell (CL0000071)
Fold Change: 0.33
Marker Score: 334 - Cell Name: kidney capillary endothelial cell (CL1000892)
Fold Change: 0.33
Marker Score: 103 - Cell Name: microglial cell (CL0000129)
Fold Change: 0.32
Marker Score: 581 - Cell Name: pancreatic A cell (CL0000171)
Fold Change: 0.31
Marker Score: 305 - Cell Name: mature microglial cell (CL0002629)
Fold Change: 0.31
Marker Score: 112 - Cell Name: classical monocyte (CL0000860)
Fold Change: 0.31
Marker Score: 1,285 - Cell Name: primary sensory neuron (sensu Teleostei) (CL0000531)
Fold Change: 0.29
Marker Score: 99 - Cell Name: cardiac muscle cell (CL0000746)
Fold Change: 0.29
Marker Score: 3,859 - Cell Name: astrocyte (CL0000127)
Fold Change: 0.29
Marker Score: 251 - Cell Name: oligodendrocyte (CL0000128)
Fold Change: 0.28
Marker Score: 668 - Cell Name: pancreatic PP cell (CL0002275)
Fold Change: 0.26
Marker Score: 90 - Cell Name: CD14-positive, CD16-negative classical monocyte (CL0002057)
Fold Change: 0.26
Marker Score: 14,606 - Cell Name: endothelial cell (CL0000115)
Fold Change: 0.25
Marker Score: 228 - Cell Name: interneuron (CL0000099)
Fold Change: 0.25
Marker Score: 115 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 0.25
Marker Score: 146 - Cell Name: retinal pigment epithelial cell (CL0002586)
Fold Change: 0.24
Marker Score: 71 - Cell Name: ciliated epithelial cell (CL0000067)
Fold Change: 0.24
Marker Score: 108 - Cell Name: neutrophil (CL0000775)
Fold Change: 0.24
Marker Score: 144 - Cell Name: luminal cell of prostate epithelium (CL0002340)
Fold Change: 0.23
Marker Score: 136 - Cell Name: ependymal cell (CL0000065)
Fold Change: 0.23
Marker Score: 79 - Cell Name: vascular leptomeningeal cell (CL4023051)
Fold Change: 0.22
Marker Score: 255 - Cell Name: melanocyte (CL0000148)
Fold Change: 0.22
Marker Score: 89 - Cell Name: oocyte (CL0000023)
Fold Change: 0.22
Marker Score: 54 - Cell Name: lens fiber cell (CL0011004)
Fold Change: 0.22
Marker Score: 69 - Cell Name: cerebral cortex endothelial cell (CL1001602)
Fold Change: 0.22
Marker Score: 130 - Cell Name: retinal ganglion cell (CL0000740)
Fold Change: 0.21
Marker Score: 265 - Cell Name: ganglion interneuron (CL0000397)
Fold Change: 0.21
Marker Score: 64 - Cell Name: astrocyte of the cerebral cortex (CL0002605)
Fold Change: 0.2
Marker Score: 4,263 - Cell Name: papillary tips cell (CL1000597)
Fold Change: 0.2
Marker Score: 40 - Cell Name: T cell (CL0000084)
Fold Change: 0.19
Marker Score: 335 - Cell Name: glial cell (CL0000125)
Fold Change: 0.19
Marker Score: 211 - Cell Name: dendritic cell (CL0000451)
Fold Change: 0.18
Marker Score: 126 - Cell Name: glycinergic amacrine cell (CL4030028)
Fold Change: 0.18
Marker Score: 172 - Cell Name: glutamatergic neuron (CL0000679)
Fold Change: 0.18
Marker Score: 1,828 - Cell Name: cerebellar granule cell precursor (CL0002362)
Fold Change: 0.18
Marker Score: 101 - Cell Name: Bergmann glial cell (CL0000644)
Fold Change: 0.18
Marker Score: 73 - Cell Name: non-classical monocyte (CL0000875)
Fold Change: 0.17
Marker Score: 422 - Cell Name: pericyte (CL0000669)
Fold Change: 0.17
Marker Score: 99 - Cell Name: mast cell (CL0000097)
Fold Change: 0.17
Marker Score: 98 - Cell Name: platelet (CL0000233)
Fold Change: 0.17
Marker Score: 76 - Cell Name: Schwann cell (CL0002573)
Fold Change: 0.16
Marker Score: 57 - Cell Name: fibroblast of cardiac tissue (CL0002548)
Fold Change: 0.16
Marker Score: 975 - Cell Name: intermediate monocyte (CL0002393)
Fold Change: 0.16
Marker Score: 56 - Cell Name: large intestine goblet cell (CL1000320)
Fold Change: 0.16
Marker Score: 42 - Cell Name: glycinergic neuron (CL1001509)
Fold Change: 0.16
Marker Score: 191 - Cell Name: myeloid cell (CL0000763)
Fold Change: 0.16
Marker Score: 253
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 2934876966
Symbol: RP3A_HUMAN
Name: Rabphilin-3A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 10231032
Title: Prediction of the coding sequences of unidentified human genes. XIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.
PubMed ID: 10231032
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 15207266
Title: Abnormal alpha-synuclein interactions with rab3a and rabphilin in diffuse Lewy body disease.
PubMed ID: 15207266
Sequence Information:
- Length: 694
- Mass: 76872
- Checksum: BD9C43F306A04D69
- Sequence:
MTDTVFSNSS NRWMYPSDRP LQSNDKEQLQ AGWSVHPGGQ PDRQRKQEEL TDEEKEIINR VIARAEKMEE MEQERIGRLV DRLENMRKNV AGDGVNRCIL CGEQLGMLGS ACVVCEDCKK NVCTKCGVET NNRLHSVWLC KICIEQREVW KRSGAWFFKG FPKQVLPQPM PIKKTKPQQP VSEPAAPEQP APEPKHPARA PARGDSEDRR GPGQKTGPDP ASAPGRGNYG PPVRRASEAR MSSSSRDSES WDHSGGAGDS SRSPAGLRRA NSVQASRPAP GSVQSPAPPQ PGQPGTPGGS RPGPGPAGRF PDQKPEVAPS DPGTTAPPRE ERTGGVGGYP AVGAREDRMS HPSGPYSQAS AAAPQPAAAR QPPPPEEEEE EANSYDSDEA TTLGALEFSL LYDQDNSSLQ CTIIKAKGLK PMDSNGLADP YVKLHLLPGA SKSNKLRTKT LRNTRNPIWN ETLVYHGITD EDMQRKTLRI SVCDEDKFGH NEFIGETRFS LKKLKPNQRK NFNICLERVI PMKRAGTTGS ARGMALYEEE QVERVGDIEE RGKILVSLMY STQQGGLIVG IIRCVHLAAM DANGYSDPFV KLWLKPDMGK KAKHKTQIKK KTLNPEFNEE FFYDIKHSDL AKKSLDISVW DYDIGKSNDY IGGCQLGISA KGERLKHWYE CLKNKDKKIE RWHQLQNENH VSSD
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.