Details for: ABCF1
Associated with
Cells (max top 100)
(Marker Scores and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: extravillous trophoblast (CL0008036)
Fold Change: 3.16
Marker Score: 2,824 - Cell Name: fibroblast of mammary gland (CL0002555)
Fold Change: 1.9
Marker Score: 64,727 - Cell Name: bladder urothelial cell (CL1001428)
Fold Change: 1.76
Marker Score: 2,590 - Cell Name: CD8-positive, alpha-beta memory T cell (CL0000909)
Fold Change: 1.67
Marker Score: 1,420 - Cell Name: placental villous trophoblast (CL2000060)
Fold Change: 1.64
Marker Score: 6,448 - Cell Name: stromal cell of ovary (CL0002132)
Fold Change: 1.6
Marker Score: 18,026 - Cell Name: cortical thymic epithelial cell (CL0002364)
Fold Change: 1.59
Marker Score: 5,870 - Cell Name: basal cell of prostate epithelium (CL0002341)
Fold Change: 1.58
Marker Score: 3,859 - Cell Name: cell in vitro (CL0001034)
Fold Change: 1.57
Marker Score: 54,370 - Cell Name: myeloid leukocyte (CL0000766)
Fold Change: 1.55
Marker Score: 1,866 - Cell Name: myeloid dendritic cell (CL0000782)
Fold Change: 1.52
Marker Score: 921 - Cell Name: male germ cell (CL0000015)
Fold Change: 1.5
Marker Score: 431 - Cell Name: proerythroblast (CL0000547)
Fold Change: 1.49
Marker Score: 1,009 - Cell Name: myoepithelial cell of mammary gland (CL0002324)
Fold Change: 1.49
Marker Score: 7,303 - Cell Name: nasal mucosa goblet cell (CL0002480)
Fold Change: 1.45
Marker Score: 968 - Cell Name: conjunctival epithelial cell (CL1000432)
Fold Change: 1.45
Marker Score: 1,523 - Cell Name: CD14-low, CD16-positive monocyte (CL0002396)
Fold Change: 1.44
Marker Score: 1,018 - Cell Name: acinar cell of salivary gland (CL0002623)
Fold Change: 1.43
Marker Score: 3,259 - Cell Name: primordial germ cell (CL0000670)
Fold Change: 1.4
Marker Score: 1,761 - Cell Name: squamous epithelial cell (CL0000076)
Fold Change: 1.38
Marker Score: 940 - Cell Name: pancreatic ductal cell (CL0002079)
Fold Change: 1.35
Marker Score: 1,406 - Cell Name: skeletal muscle satellite stem cell (CL0008011)
Fold Change: 1.35
Marker Score: 1,439 - Cell Name: skeletal muscle satellite cell (CL0000594)
Fold Change: 1.34
Marker Score: 899 - Cell Name: pancreatic stellate cell (CL0002410)
Fold Change: 1.3
Marker Score: 819 - Cell Name: plasmablast (CL0000980)
Fold Change: 1.29
Marker Score: 1,715 - Cell Name: hematopoietic cell (CL0000988)
Fold Change: 1.28
Marker Score: 853 - Cell Name: kidney epithelial cell (CL0002518)
Fold Change: 1.28
Marker Score: 1,356 - Cell Name: CD8-positive, alpha-beta cytokine secreting effector T cell (CL0000908)
Fold Change: 1.28
Marker Score: 553 - Cell Name: bronchial goblet cell (CL1000312)
Fold Change: 1.28
Marker Score: 632 - Cell Name: lung endothelial cell (CL1001567)
Fold Change: 1.27
Marker Score: 11,121 - Cell Name: epithelial cell of urethra (CL1000296)
Fold Change: 1.27
Marker Score: 998 - Cell Name: eye photoreceptor cell (CL0000287)
Fold Change: 1.25
Marker Score: 371 - Cell Name: tracheobronchial smooth muscle cell (CL0019019)
Fold Change: 1.24
Marker Score: 364 - Cell Name: bronchus fibroblast of lung (CL2000093)
Fold Change: 1.24
Marker Score: 1,705 - Cell Name: blood cell (CL0000081)
Fold Change: 1.24
Marker Score: 14,410 - Cell Name: classical monocyte (CL0000860)
Fold Change: 1.24
Marker Score: 5,137 - Cell Name: pro-T cell (CL0000827)
Fold Change: 1.22
Marker Score: 4,997 - Cell Name: epithelial cell of nephron (CL1000449)
Fold Change: 1.22
Marker Score: 2,543 - Cell Name: DN3 thymocyte (CL0000807)
Fold Change: 1.21
Marker Score: 604 - Cell Name: supporting cell (CL0000630)
Fold Change: 1.2
Marker Score: 2,252 - Cell Name: microfold cell of epithelium of small intestine (CL1000353)
Fold Change: 1.18
Marker Score: 282 - Cell Name: epicardial adipocyte (CL1000309)
Fold Change: 1.16
Marker Score: 563 - Cell Name: oogonial cell (CL0000024)
Fold Change: 1.16
Marker Score: 1,664 - Cell Name: osteoclast (CL0000092)
Fold Change: 1.15
Marker Score: 575 - Cell Name: primitive red blood cell (CL0002355)
Fold Change: 1.15
Marker Score: 862 - Cell Name: type A enteroendocrine cell (CL0002067)
Fold Change: 1.15
Marker Score: 463 - Cell Name: enterocyte (CL0000584)
Fold Change: 1.14
Marker Score: 5,493 - Cell Name: CD4-positive, alpha-beta thymocyte (CL0000810)
Fold Change: 1.14
Marker Score: 638 - Cell Name: radial glial cell (CL0000681)
Fold Change: 1.14
Marker Score: 421 - Cell Name: mesenchymal cell (CL0008019)
Fold Change: 1.14
Marker Score: 1,939 - Cell Name: enterocyte of epithelium of large intestine (CL0002071)
Fold Change: 1.14
Marker Score: 1,137 - Cell Name: foveolar cell of stomach (CL0002179)
Fold Change: 1.14
Marker Score: 7,251 - Cell Name: fraction A pre-pro B cell (CL0002045)
Fold Change: 1.14
Marker Score: 1,143 - Cell Name: CD8-positive, alpha-beta memory T cell, CD45RO-positive (CL0001203)
Fold Change: 1.13
Marker Score: 3,180 - Cell Name: enteric smooth muscle cell (CL0002504)
Fold Change: 1.13
Marker Score: 2,668 - Cell Name: progenitor cell of mammary luminal epithelium (CL0009116)
Fold Change: 1.13
Marker Score: 4,355 - Cell Name: fibroblast of breast (CL4006000)
Fold Change: 1.12
Marker Score: 638 - Cell Name: hepatocyte (CL0000182)
Fold Change: 1.11
Marker Score: 761 - Cell Name: retinal blood vessel endothelial cell (CL0002585)
Fold Change: 1.11
Marker Score: 267 - Cell Name: blood vessel smooth muscle cell (CL0019018)
Fold Change: 1.1
Marker Score: 290 - Cell Name: Leydig cell (CL0000178)
Fold Change: 1.1
Marker Score: 1,185 - Cell Name: DN1 thymic pro-T cell (CL0000894)
Fold Change: 1.1
Marker Score: 340 - Cell Name: CD8-alpha-alpha-positive, alpha-beta intraepithelial T cell (CL0000915)
Fold Change: 1.09
Marker Score: 1,550 - Cell Name: common lymphoid progenitor (CL0000051)
Fold Change: 1.09
Marker Score: 743 - Cell Name: cardiac muscle cell (CL0000746)
Fold Change: 1.08
Marker Score: 14,423 - Cell Name: large pre-B-II cell (CL0000957)
Fold Change: 1.08
Marker Score: 2,946 - Cell Name: mature T cell (CL0002419)
Fold Change: 1.08
Marker Score: 10,715 - Cell Name: luminal epithelial cell of mammary gland (CL0002326)
Fold Change: 1.07
Marker Score: 1,890 - Cell Name: Unknown (CL0000548)
Fold Change: 1.06
Marker Score: 775 - Cell Name: adventitial cell (CL0002503)
Fold Change: 1.06
Marker Score: 263 - Cell Name: epithelial cell (CL0000066)
Fold Change: 1.06
Marker Score: 1,686 - Cell Name: pneumocyte (CL0000322)
Fold Change: 1.06
Marker Score: 1,702 - Cell Name: paneth cell of colon (CL0009009)
Fold Change: 1.05
Marker Score: 303 - Cell Name: bronchial epithelial cell (CL0002328)
Fold Change: 1.05
Marker Score: 279 - Cell Name: ependymal cell (CL0000065)
Fold Change: 1.05
Marker Score: 365 - Cell Name: nephron tubule epithelial cell (CL1000494)
Fold Change: 1.04
Marker Score: 245 - Cell Name: enteric neuron (CL0007011)
Fold Change: 1.04
Marker Score: 555 - Cell Name: megakaryocyte (CL0000556)
Fold Change: 1.04
Marker Score: 591 - Cell Name: kidney cell (CL1000497)
Fold Change: 1.04
Marker Score: 693 - Cell Name: endothelial cell of uterus (CL0009095)
Fold Change: 1.04
Marker Score: 2,074 - Cell Name: endothelial cell of hepatic sinusoid (CL1000398)
Fold Change: 1.04
Marker Score: 227 - Cell Name: hematopoietic multipotent progenitor cell (CL0000837)
Fold Change: 1.03
Marker Score: 505 - Cell Name: mucous neck cell (CL0000651)
Fold Change: 1.03
Marker Score: 2,347 - Cell Name: corneal epithelial cell (CL0000575)
Fold Change: 1.03
Marker Score: 1,140 - Cell Name: stem cell (CL0000034)
Fold Change: 1.03
Marker Score: 2,451 - Cell Name: B-1 B cell (CL0000819)
Fold Change: 1.03
Marker Score: 1,794 - Cell Name: natural T-regulatory cell (CL0000903)
Fold Change: 1.02
Marker Score: 527 - Cell Name: luminal cell of prostate epithelium (CL0002340)
Fold Change: 1.02
Marker Score: 596 - Cell Name: epithelial cell of lung (CL0000082)
Fold Change: 1.02
Marker Score: 5,375 - Cell Name: choroid plexus epithelial cell (CL0000706)
Fold Change: 1.02
Marker Score: 938 - Cell Name: mesenchymal stem cell (CL0000134)
Fold Change: 1.02
Marker Score: 1,567 - Cell Name: medullary thymic epithelial cell (CL0002365)
Fold Change: 1.01
Marker Score: 1,661 - Cell Name: stromal cell (CL0000499)
Fold Change: 1.01
Marker Score: 1,184 - Cell Name: duct epithelial cell (CL0000068)
Fold Change: 1.01
Marker Score: 471 - Cell Name: leukocyte (CL0000738)
Fold Change: 1.01
Marker Score: 578 - Cell Name: mucus secreting cell (CL0000319)
Fold Change: 1.01
Marker Score: 256 - Cell Name: stem cell of epidermis (CL1000428)
Fold Change: 1
Marker Score: 340 - Cell Name: keratocyte (CL0002363)
Fold Change: 1
Marker Score: 231 - Cell Name: neural crest cell (CL0011012)
Fold Change: 1
Marker Score: 1,071 - Cell Name: respiratory goblet cell (CL0002370)
Fold Change: 1
Marker Score: 289
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 2322123127
Symbol: ABCF1_HUMAN
Name: ATP-binding cassette sub-family F member 1
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 9790762
Title: ABC50, a novel human ATP-binding cassette protein found in tumor necrosis factor-alpha-stimulated synoviocytes.
PubMed ID: 9790762
PubMed ID: 14574404
Title: The DNA sequence and analysis of human chromosome 6.
PubMed ID: 14574404
DOI: 10.1038/nature02055
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 17974005
Title: The full-ORF clone resource of the German cDNA consortium.
PubMed ID: 17974005
PubMed ID: 17081983
Title: Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.
PubMed ID: 17081983
PubMed ID: 16964243
Title: A probability-based approach for high-throughput protein phosphorylation analysis and site localization.
PubMed ID: 16964243
DOI: 10.1038/nbt1240
PubMed ID: 17525332
Title: ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage.
PubMed ID: 17525332
PubMed ID: 17894550
Title: The N-terminal region of ABC50 interacts with eukaryotic initiation factor eIF2 and is a target for regulatory phosphorylation by CK2.
PubMed ID: 17894550
DOI: 10.1042/bj20070811
PubMed ID: 18088087
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 18318008
Title: Large-scale phosphoproteome analysis of human liver tissue by enrichment and fractionation of phosphopeptides with strong anion exchange chromatography.
PubMed ID: 18318008
PubMed ID: 19413330
Title: Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.
PubMed ID: 19413330
DOI: 10.1021/ac9004309
PubMed ID: 19570978
Title: ABC50 promotes translation initiation in mammalian cells.
PubMed ID: 19570978
PubMed ID: 19690332
Title: Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.
PubMed ID: 19690332
PubMed ID: 20068231
Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
PubMed ID: 20068231
PubMed ID: 21269460
Title: Initial characterization of the human central proteome.
PubMed ID: 21269460
PubMed ID: 21406692
Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.
PubMed ID: 21406692
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 24275569
Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.
PubMed ID: 24275569
Sequence Information:
- Length: 845
- Mass: 95926
- Checksum: 5C5AA662DF4C99E4
- Sequence:
MPKAPKQQPP EPEWIGDGES TSPSDKVVKK GKKDKKIKKT FFEELAVEDK QAGEEEKVLK EKEQQQQQQQ QQQKKKRDTR KGRRKKDVDD DGEEKELMER LKKLSVPTSD EEDEVPAPKP RGGKKTKGGN VFAALIQDQS EEEEEEEKHP PKPAKPEKNR INKAVSEEQQ PALKGKKGKE EKSKGKAKPQ NKFAALDNEE EDKEEEIIKE KEPPKQGKEK AKKAEQGSEE EGEGEEEEEE GGESKADDPY AHLSKKEKKK LKKQMEYERQ VASLKAANAA ENDFSVSQAE MSSRQAMLEN ASDIKLEKFS ISAHGKELFV NADLYIVAGR RYGLVGPNGK GKTTLLKHIA NRALSIPPNI DVLLCEQEVV ADETPAVQAV LRADTKRLKL LEEERRLQGQ LEQGDDTAAE RLEKVYEELR ATGAAAAEAK ARRILAGLGF DPEMQNRPTQ KFSGGWRMRV SLARALFMEP TLLMLDEPTN HLDLNAVIWL NNYLQGWRKT LLIVSHDQGF LDDVCTDIIH LDAQRLHYYR GNYMTFKKMY QQKQKELLKQ YEKQEKKLKE LKAGGKSTKQ AEKQTKEALT RKQQKCRRKN QDEESQEAPE LLKRPKEYTV RFTFPDPPPL SPPVLGLHGV TFGYQGQKPL FKNLDFGIDM DSRICIVGPN GVGKSTLLLL LTGKLTPTHG EMRKNHRLKI GFFNQQYAEQ LRMEETPTEY LQRGFNLPYQ DARKCLGRFG LESHAHTIQI CKLSGGQKAR VVFAELACRE PDVLILDEPT NNLDIESIDA LGEAINEYKG AVIVVSHDAR LITETNCQLW VVEEQSVSQI DGDFEDYKRE VLEALGEVMV SRPRE
Genular Protein ID: 2196753924
Symbol: Q2L6I2_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 11181995
PubMed ID: 16702430
Title: Rapid evolution of major histocompatibility complex class I genes in primates generates new disease alleles in humans via hitchhiking diversity.
PubMed ID: 16702430
Sequence Information:
- Length: 807
- Mass: 91680
- Checksum: 1B6547EABEE7FC75
- Sequence:
MPKAPKQQPP EPEWIGDGES TSPSDKVVKK GKKDKKIKKT FFEELAVEDK QAGEEEKVLK EKEQQQQQQQ QQQKKKRDTR KGRRKKDVDD DGEEKELMER LKKLSVPTSD EEDEVPAPKP RGGKKTKGGN VFAALIQDQS EEEEEEEKHP PKPAKPEKNR INKAVSEEQQ PALKGKKGKE EKSKGKAKPQ NKFAALDNEE EDKEEEIIKE KEPPKQGKEK AKKAEQMEYE RQVASLKAAN AAENDFSVSQ AEMSSRQAML ENASDIKLEK FSISAHGKEL FVNADLYIVA GRRYGLVGPN GKGKTTLLKH IANRALSIPP NIDVLLCEQE VVADETPAVQ AVLRADTKRL KLLEEERRLQ GQLEQGDDTA AERLEKVYEE LRATGAAAAE AKARRILAGL GFDPEMQNRP TQKFSGGWRM RVSLARALFM EPTLLMLDEP TNHLDLNAVI WLNNYLQGWR KTLLIVSHDQ GFLDDVCTDI IHLDAQRLHY YRGNYMTFKK MYQQKQKELL KQYEKQEKKL KELKAGGKST KQAEKQTKEA LTRKQQKCRR KNQDEESQEA PELLKRPKEY TVRFTFPDPP PLSPPVLGLH GVTFGYQGQK PLFKNLDFGI DMDSRICIVG PNGVGKSTLL LLLTGKLTPT HGEMRKNHRL KIGFFNQQYA EQLRMEETPT EYLQRGFNLP YQDARKCLGR FGLESHAHTI QICKLSGGQK ARVVFAELAC REPDVLILDE PTNNLDIESI DALGEAINEY KGAVIVVSHD ARLITETNCQ LWVVEEQSVS QIDGDFEDYK REVLEALGEV MVSRPRE
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.