Details for: VPS8
Associated with
Cells (max top 100)
(Marker Scores and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)
- Cell Name: regular ventricular cardiac myocyte (CL0002131)
Fold Change: 2.93
Marker Score: 65,514 - Cell Name: corneal epithelial cell (CL0000575)
Fold Change: 2.33
Marker Score: 2,577 - Cell Name: sst GABAergic cortical interneuron (CL4023017)
Fold Change: 2.18
Marker Score: 43,425 - Cell Name: skeletal muscle fiber (CL0008002)
Fold Change: 2.18
Marker Score: 5,466 - Cell Name: astrocyte of the cerebral cortex (CL0002605)
Fold Change: 2.11
Marker Score: 45,047 - Cell Name: ciliary muscle cell (CL1000443)
Fold Change: 2.11
Marker Score: 4,625 - Cell Name: sncg GABAergic cortical interneuron (CL4023015)
Fold Change: 2.07
Marker Score: 15,847 - Cell Name: vip GABAergic cortical interneuron (CL4023016)
Fold Change: 2.05
Marker Score: 77,748 - Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
Fold Change: 2.04
Marker Score: 75,380 - Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
Fold Change: 1.99
Marker Score: 18,733 - Cell Name: secondary lens fiber (CL0002225)
Fold Change: 1.97
Marker Score: 1,151 - Cell Name: lens epithelial cell (CL0002224)
Fold Change: 1.94
Marker Score: 2,342 - Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
Fold Change: 1.91
Marker Score: 117,594 - Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
Fold Change: 1.91
Marker Score: 28,497 - Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
Fold Change: 1.87
Marker Score: 7,743 - Cell Name: neuron (CL0000540)
Fold Change: 1.86
Marker Score: 7,566 - Cell Name: caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
Fold Change: 1.83
Marker Score: 7,087 - Cell Name: dopaminergic neuron (CL0000700)
Fold Change: 1.83
Marker Score: 18,928 - Cell Name: OFF retinal ganglion cell (CL4023033)
Fold Change: 1.83
Marker Score: 765 - Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
Fold Change: 1.81
Marker Score: 17,212 - Cell Name: anterior lens cell (CL0002223)
Fold Change: 1.8
Marker Score: 2,427 - Cell Name: Purkinje cell (CL0000121)
Fold Change: 1.8
Marker Score: 60,765 - Cell Name: inhibitory interneuron (CL0000498)
Fold Change: 1.76
Marker Score: 8,131 - Cell Name: L6b glutamatergic cortical neuron (CL4023038)
Fold Change: 1.75
Marker Score: 15,015 - Cell Name: pigmented epithelial cell (CL0000529)
Fold Change: 1.74
Marker Score: 7,276 - Cell Name: cell of skeletal muscle (CL0000188)
Fold Change: 1.68
Marker Score: 1,276 - Cell Name: central nervous system macrophage (CL0000878)
Fold Change: 1.66
Marker Score: 824 - Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
Fold Change: 1.64
Marker Score: 479 - Cell Name: pyramidal neuron (CL0000598)
Fold Change: 1.61
Marker Score: 2,698 - Cell Name: cardiac neuron (CL0010022)
Fold Change: 1.58
Marker Score: 1,963 - Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
Fold Change: 1.53
Marker Score: 2,358 - Cell Name: corneal endothelial cell (CL0000132)
Fold Change: 1.52
Marker Score: 887 - Cell Name: vascular leptomeningeal cell (CL4023051)
Fold Change: 1.52
Marker Score: 1,748 - Cell Name: cerebral cortex neuron (CL0010012)
Fold Change: 1.51
Marker Score: 4,296 - Cell Name: kidney interstitial fibroblast (CL1000692)
Fold Change: 1.5
Marker Score: 2,890 - Cell Name: oligodendrocyte (CL0000128)
Fold Change: 1.38
Marker Score: 3,312 - Cell Name: renal principal cell (CL0005009)
Fold Change: 1.38
Marker Score: 1,062 - Cell Name: ON retinal ganglion cell (CL4023032)
Fold Change: 1.38
Marker Score: 376 - Cell Name: cerebral cortex endothelial cell (CL1001602)
Fold Change: 1.36
Marker Score: 809 - Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
Fold Change: 1.35
Marker Score: 425 - Cell Name: brainstem motor neuron (CL2000047)
Fold Change: 1.29
Marker Score: 748 - Cell Name: renal alpha-intercalated cell (CL0005011)
Fold Change: 1.29
Marker Score: 678 - Cell Name: mature microglial cell (CL0002629)
Fold Change: 1.29
Marker Score: 465 - Cell Name: A2 amacrine cell (CL0004219)
Fold Change: 1.26
Marker Score: 401 - Cell Name: epithelial cell of prostate (CL0002231)
Fold Change: 1.26
Marker Score: 872 - Cell Name: basal epithelial cell of tracheobronchial tree (CL0002329)
Fold Change: 1.24
Marker Score: 1,408 - Cell Name: cardiac muscle myoblast (CL0000513)
Fold Change: 1.21
Marker Score: 18,984 - Cell Name: lactocyte (CL0002325)
Fold Change: 1.19
Marker Score: 19,109 - Cell Name: GABAergic interneuron (CL0011005)
Fold Change: 1.18
Marker Score: 452 - Cell Name: kidney loop of Henle thin descending limb epithelial cell (CL1001111)
Fold Change: 1.16
Marker Score: 1,247 - Cell Name: kidney proximal straight tubule epithelial cell (CL1000839)
Fold Change: 1.14
Marker Score: 2,694 - Cell Name: immature innate lymphoid cell (CL0001082)
Fold Change: 1.14
Marker Score: 2,324 - Cell Name: cortical cell of adrenal gland (CL0002097)
Fold Change: 1.13
Marker Score: 20,105 - Cell Name: oligodendrocyte precursor cell (CL0002453)
Fold Change: 1.11
Marker Score: 1,377 - Cell Name: renal interstitial pericyte (CL1001318)
Fold Change: 1.11
Marker Score: 1,057 - Cell Name: astrocyte (CL0000127)
Fold Change: 1.11
Marker Score: 960 - Cell Name: cerebellar granule cell precursor (CL0002362)
Fold Change: 1.11
Marker Score: 621 - Cell Name: alveolar type 2 fibroblast cell (CL4028006)
Fold Change: 1.09
Marker Score: 608 - Cell Name: basal epithelial cell of prostatic duct (CL0002236)
Fold Change: 1.09
Marker Score: 969 - Cell Name: lung goblet cell (CL1000143)
Fold Change: 1.09
Marker Score: 313 - Cell Name: neuron associated cell (sensu Vertebrata) (CL0000123)
Fold Change: 1.03
Marker Score: 5,400 - Cell Name: fat cell (CL0000136)
Fold Change: 1.02
Marker Score: 569 - Cell Name: cerebral cortex GABAergic interneuron (CL0010011)
Fold Change: 1
Marker Score: 71,695 - Cell Name: podocyte (CL0000653)
Fold Change: 1
Marker Score: 368 - Cell Name: forebrain radial glial cell (CL0013000)
Fold Change: 1
Marker Score: 47,920 - Cell Name: taste receptor cell (CL0000209)
Fold Change: 0.99
Marker Score: 854 - Cell Name: endothelial cell of pericentral hepatic sinusoid (CL0019022)
Fold Change: 0.98
Marker Score: 1,053 - Cell Name: absorptive cell (CL0000212)
Fold Change: 0.98
Marker Score: 30,390 - Cell Name: smooth muscle cell of prostate (CL1000487)
Fold Change: 0.97
Marker Score: 248 - Cell Name: parietal epithelial cell (CL1000452)
Fold Change: 0.96
Marker Score: 349 - Cell Name: mesangial cell (CL0000650)
Fold Change: 0.96
Marker Score: 1,160 - Cell Name: kidney connecting tubule epithelial cell (CL1000768)
Fold Change: 0.96
Marker Score: 1,360 - Cell Name: mature astrocyte (CL0002627)
Fold Change: 0.95
Marker Score: 627 - Cell Name: pigmented ciliary epithelial cell (CL0002303)
Fold Change: 0.95
Marker Score: 322 - Cell Name: intestinal crypt stem cell of colon (CL0009043)
Fold Change: 0.94
Marker Score: 2,399 - Cell Name: tuft cell of colon (CL0009041)
Fold Change: 0.94
Marker Score: 482 - Cell Name: regular atrial cardiac myocyte (CL0002129)
Fold Change: 0.93
Marker Score: 3,322 - Cell Name: syncytiotrophoblast cell (CL0000525)
Fold Change: 0.93
Marker Score: 767 - Cell Name: cholangiocyte (CL1000488)
Fold Change: 0.93
Marker Score: 349 - Cell Name: contractile cell (CL0000183)
Fold Change: 0.93
Marker Score: 502 - Cell Name: centrilobular region hepatocyte (CL0019029)
Fold Change: 0.93
Marker Score: 5,953 - Cell Name: BEST4+ intestinal epithelial cell, human (CL4030026)
Fold Change: 0.92
Marker Score: 436 - Cell Name: intestinal epithelial cell (CL0002563)
Fold Change: 0.91
Marker Score: 1,482 - Cell Name: abnormal cell (CL0001061)
Fold Change: 0.9
Marker Score: 2,708 - Cell Name: skeletal muscle fibroblast (CL0011027)
Fold Change: 0.89
Marker Score: 585 - Cell Name: lymphoid lineage restricted progenitor cell (CL0000838)
Fold Change: 0.89
Marker Score: 534 - Cell Name: epicardial adipocyte (CL1000309)
Fold Change: 0.88
Marker Score: 428 - Cell Name: stellate neuron (CL0000122)
Fold Change: 0.88
Marker Score: 4,728 - Cell Name: mononuclear cell (CL0000842)
Fold Change: 0.88
Marker Score: 282 - Cell Name: neoplastic cell (CL0001063)
Fold Change: 0.87
Marker Score: 5,294 - Cell Name: oogonial cell (CL0000024)
Fold Change: 0.86
Marker Score: 1,242 - Cell Name: epithelial cell of lower respiratory tract (CL0002632)
Fold Change: 0.86
Marker Score: 3,588 - Cell Name: epithelial cell of small intestine (CL0002254)
Fold Change: 0.86
Marker Score: 308 - Cell Name: leptomeningeal cell (CL0000708)
Fold Change: 0.85
Marker Score: 422 - Cell Name: midzonal region hepatocyte (CL0019028)
Fold Change: 0.85
Marker Score: 3,678 - Cell Name: transit amplifying cell (CL0009010)
Fold Change: 0.85
Marker Score: 4,851 - Cell Name: pulmonary interstitial fibroblast (CL0002241)
Fold Change: 0.85
Marker Score: 680 - Cell Name: fibroblast of cardiac tissue (CL0002548)
Fold Change: 0.82
Marker Score: 4,910 - Cell Name: adipocyte of epicardial fat of left ventricle (CL1000311)
Fold Change: 0.82
Marker Score: 215 - Cell Name: macroglial cell (CL0000126)
Fold Change: 0.82
Marker Score: 1,877
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.
Other Information
Genular Protein ID: 756327349
Symbol: VPS8_HUMAN
Name: Vacuolar protein sorting-associated protein 8 homolog
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
PubMed ID: 17974005
Title: The full-ORF clone resource of the German cDNA consortium.
PubMed ID: 17974005
PubMed ID: 16641997
Title: The DNA sequence, annotation and analysis of human chromosome 3.
PubMed ID: 16641997
DOI: 10.1038/nature04728
PubMed ID: 15489334
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
PubMed ID: 15489334
DOI: 10.1101/gr.2596504
PubMed ID: 9872452
Title: Prediction of the coding sequences of unidentified human genes. XI. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.
PubMed ID: 9872452
PubMed ID: 18669648
Title: A quantitative atlas of mitotic phosphorylation.
PubMed ID: 18669648
PubMed ID: 20068231
Title: Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
PubMed ID: 20068231
PubMed ID: 21406692
Title: System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation.
PubMed ID: 21406692
PubMed ID: 23186163
Title: Toward a comprehensive characterization of a human cancer cell phosphoproteome.
PubMed ID: 23186163
DOI: 10.1021/pr300630k
PubMed ID: 25266290
Title: Mammalian CORVET is required for fusion and conversion of distinct early endosome subpopulations.
PubMed ID: 25266290
DOI: 10.1111/tra.12232
Sequence Information:
- Length: 1428
- Mass: 161754
- Checksum: 97FB5E8D453BBCB6
- Sequence:
MENEPDHENV EQSLCAKTSE EELNKSFNLE ASLSKFSYID MDKELEFKND LIDDKEFDIP QVDTPPTLES ILNETDDEDE SFILEDPTLL NIDTIDSHSY DTSSVASSDS GDRTNLKRKK KLPDSFSLHG SVMRHSLLKG ISAQIVSAAD KVDAGLPTAI AVSSLIAVGT SHGLALIFGK DQNQALRLCL GSTSVGGQYG AISALSINND CSRLLCGFAK GQITMWDLAS GKLLRSITDA HPPGTAILHI KFTDDPTLAI CNDSGGSVFE LTFKRVMGVR TCESRCLFSG SKGEVCCIEP LHSKPELKDH PITQFSLLAM ASLTKILVIG LKPSLKVWMT FPYGRMDPSS VPLLAWHFVA VQNYVNPMLA FCRGDVVHFL LVKRDESGAI HVTKQKHLHL YYDLINFTWI NSRTVVLLDS VEKLHVIDRQ TQEELETVEI SEVQLVYNSS HFKSLATGGN VSQALALVGE KACYQSISSY GGQIFYLGTK SVYVMMLRSW RERVDHLLKQ DCLTEALALA WSFHEGKAKA VVGLSGDASK RKAIVADRMV EILFHYADRA LKKCPDQGKI QVMEQHFQDM VPVIVDYCLL LQRKDLLFSQ MYDKLSENSV AKGVFLECLE PYILSDKLVG ITPQVMKDLI VHFQDKKLME NVEALIVHMD ITSLDIQQVV LMCWENRLYD AMIYVYNRGM NEFISPMEKL FRVIAPPLNA GKTLTDEQVV MGNKLLVYIS CCLAGRAYPL GDIPEDLVPL VKNQVFEFLI RLHSAEASPE EEIYPYIRTL LHFDTREFLN VLALTFEDFK NDKQAVEYQQ RIVDILLKVM VENSDFTPSQ VGCLFTFLAR QLAKPDNTLF VNRTLFDQVL EFLCSPDDDS RHSERQQVLL ELLQAGGIVQ FEESRLIRMA EKAEFYQICE FMYEREHQYD KIIDCYLRDP LREEEVFNYI HNILSIPGHS AEEKQSVWQK AMDHIEELVS LKPCKAAELV ATHFSGHIET VIKKLQNQVL LFKFLRSLLD PREGIHVNQE LLQISPCITE QFIELLCQFN PTQVIETLQV LECYRLEETI QITQKYQLHE VTAYLLEKKG DIHGAFLIML ERLQSKLQEV THQGENTKED PSLKDVEDTM VETIALCQRN SHNLNQQQRE ALWFPLLEAM MAPQKLSSSA IPHLHSEALK SLTMQVLNSM AAFIALPSIL QRILQDPVYG KGKLGEIQGL ILGMLDTFNY EQTLLETTTS LLNQDLHWSL CNLRASVTRG LNPKQDYCSI CLQQYKRRQE MADEIIVFSC GHLYHSFCLQ NKECTVEFEG QTRWTCYKCS SSNKVGKLSE NSSEIKKGRI TPSQVKMSPS YHQSKGDPTA KKGTSEPVLD PQQIQAFDQL CRLYRGSSRL ALLTELSQNR SSESYRPFSG SQSAPAFNSI FQNENFQLQL IPPPVTED
Genular Protein ID: 1832257410
Symbol: B3KPR6_HUMAN
Name: N/A
UniProtKB Accession Codes:
Database IDs:
Citations:
PubMed ID: 14702039
Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.
PubMed ID: 14702039
DOI: 10.1038/ng1285
Sequence Information:
- Length: 1196
- Mass: 135525
- Checksum: A3EB023D29315C62
- Sequence:
MENEPDHENV EQSLCAKTSE EELNKSFNLE ASLSKFSYID MDKELEFKND LIDDKEFDIP QVDTPPTLES ILNETDDEDE SFVLEDPTLL NIDTIDSHSY DTSSVASSDS GDRTNLKRKK KLPDSFSLHG SVMRHSLLKG ISAQIVSAAD KVDAGLPTAI AVSSLIAVGT SHGLALIFGK DQNQALRLCL GSTSVGGQYG AISALSINND CSRLLCGFAK GQITMWDLAS GKLLRSITDA HPPGTAILHI KFTDDPTLAI CNDSGGSVFE LTFKRVMGVR TCESRCLFSG SKGEVCCIEP LHSKPELKDH PITQFSLLAM ASLTKILVIG LKPSLKVWMT FPYGRMDPSS VPLLAWHFVA VQNYVNPMLA FCRGDVVHFL LVKRDESGAI HVTKQKHLHL YYDLINFTWI NSRTVVLLDS VEKLHVIDRQ TQEELETVEI SEVQLVYNSS HFKSLATGGN VSQALALVGE KACYQSISSY GGQIFYLGTK SVYVMMLRSW RERVDHLLKQ DCLTEALALA WSFHEGKAKA VVGLSGDASK RKAIVADRMV EILFHYADRA LKKCPDQGKI QVMEQHFQDM VPVIVDYCLL LQRKDLLFSQ MYDKLSENSV AKGVFLECLE PYILSDKLVG ITPQVMKDLI VHFQDKKLME NVEALIVHMD ITSLDIQQVV LMCWENRLYD AMIYVYNRGM NEFISPMEKL FRVIAPPLNA GKTLTDEQVV MGNKLLVYIS CCLAGRAYPL GDIPEDLVPL VKNQVFEFLI RLHSAEASPE EEIYPYIRTL LHFDTREFLN VLALTFEDFK NDKQAVEYQQ RIVDILLKVM VENSDFTPSQ VGCLFTFLAR QLAKPDNTLF VNRTLFDQVL EFLCSPDDDS RHSERQQVLL ELLQAGGIVQ FEESRLIRMA EKAEFYQICE FMYEREHQYD KIIDCYLRDP LREEEVFNYI HNILSIPGHS AEEKQSVWQK AMDHIEELVS LKPCKAAELV ATHFSGHIET VIKKLQNQVL LFKFLRSLLD PREGIHVNQE LLQISPCITE QFIELLCQFN PTQVIETLQV LECYRLEETI QITQKYQLHE VTAYLLEKKG DIHGAFLIML ERLQSKLQEV THQGENTKED PSLKDVEDTM VETIALCQRN SHNLNQQQRE ALWFPLLEAM MAPQKLSSSA IPHLHSEALK SLTMQVLNSM AAFIALSNNK CSVFKF
Database document:
This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.