Details for: CADM1

Gene ID: 23705

Symbol: CADM1

Ensembl ID: ENSG00000182985

Description: cell adhesion molecule 1

Associated with

Cells (max top 100)

(Marker Scores and respective Thresholds are uniquely calculated using our advanced thresholding algorithms to reveal cell-specific gene markers)

  • Cell Name: chromaffin cell (CL0000166)
    Fold Change: 8.98
    Marker Score: 12,632
  • Cell Name: epithelial cell of lower respiratory tract (CL0002632)
    Fold Change: 6.96
    Marker Score: 29,002
  • Cell Name: cortical cell of adrenal gland (CL0002097)
    Fold Change: 6.81
    Marker Score: 120,974
  • Cell Name: mature astrocyte (CL0002627)
    Fold Change: 6.27
    Marker Score: 4,128
  • Cell Name: photoreceptor cell (CL0000210)
    Fold Change: 6.18
    Marker Score: 4,652
  • Cell Name: sympathetic neuron (CL0011103)
    Fold Change: 5.55
    Marker Score: 1,834
  • Cell Name: Purkinje cell (CL0000121)
    Fold Change: 4.86
    Marker Score: 164,126
  • Cell Name: cardiac neuron (CL0010022)
    Fold Change: 4.49
    Marker Score: 5,597
  • Cell Name: anterior lens cell (CL0002223)
    Fold Change: 4.3
    Marker Score: 5,783
  • Cell Name: lens epithelial cell (CL0002224)
    Fold Change: 4.18
    Marker Score: 5,060
  • Cell Name: neuronal brush cell (CL0000555)
    Fold Change: 4.16
    Marker Score: 13,945
  • Cell Name: macroglial cell (CL0000126)
    Fold Change: 4.02
    Marker Score: 9,246
  • Cell Name: GABAergic neuron (CL0000617)
    Fold Change: 4
    Marker Score: 16,698
  • Cell Name: oligodendrocyte (CL0000128)
    Fold Change: 3.79
    Marker Score: 9,079
  • Cell Name: stellate neuron (CL0000122)
    Fold Change: 3.77
    Marker Score: 20,245
  • Cell Name: Mueller cell (CL0000636)
    Fold Change: 3.63
    Marker Score: 5,035
  • Cell Name: taste receptor cell (CL0000209)
    Fold Change: 3.6
    Marker Score: 3,114
  • Cell Name: rod bipolar cell (CL0000751)
    Fold Change: 3.55
    Marker Score: 1,857
  • Cell Name: astrocyte of the cerebral cortex (CL0002605)
    Fold Change: 3.23
    Marker Score: 68,907
  • Cell Name: type I pneumocyte (CL0002062)
    Fold Change: 3.2
    Marker Score: 3,850
  • Cell Name: endocrine cell (CL0000163)
    Fold Change: 3.15
    Marker Score: 1,630
  • Cell Name: A2 amacrine cell (CL0004219)
    Fold Change: 3.09
    Marker Score: 980
  • Cell Name: brainstem motor neuron (CL2000047)
    Fold Change: 3.02
    Marker Score: 1,756
  • Cell Name: non-pigmented ciliary epithelial cell (CL0002304)
    Fold Change: 2.93
    Marker Score: 855
  • Cell Name: inhibitory interneuron (CL0000498)
    Fold Change: 2.91
    Marker Score: 13,459
  • Cell Name: lactocyte (CL0002325)
    Fold Change: 2.9
    Marker Score: 46,580
  • Cell Name: granule cell (CL0000120)
    Fold Change: 2.89
    Marker Score: 21,812
  • Cell Name: retinal rod cell (CL0000604)
    Fold Change: 2.84
    Marker Score: 8,111
  • Cell Name: cerebral cortex neuron (CL0010012)
    Fold Change: 2.74
    Marker Score: 7,813
  • Cell Name: secondary lens fiber (CL0002225)
    Fold Change: 2.72
    Marker Score: 1,593
  • Cell Name: corneal endothelial cell (CL0000132)
    Fold Change: 2.7
    Marker Score: 1,570
  • Cell Name: cerebellar granule cell precursor (CL0002362)
    Fold Change: 2.67
    Marker Score: 1,497
  • Cell Name: pigmented epithelial cell (CL0000529)
    Fold Change: 2.65
    Marker Score: 11,098
  • Cell Name: smooth muscle cell of sphincter of pupil (CL0002243)
    Fold Change: 2.64
    Marker Score: 834
  • Cell Name: pyramidal neuron (CL0000598)
    Fold Change: 2.62
    Marker Score: 4,400
  • Cell Name: sst GABAergic cortical interneuron (CL4023017)
    Fold Change: 2.61
    Marker Score: 51,912
  • Cell Name: eye photoreceptor cell (CL0000287)
    Fold Change: 2.56
    Marker Score: 762
  • Cell Name: chandelier pvalb GABAergic cortical interneuron (CL4023036)
    Fold Change: 2.52
    Marker Score: 10,447
  • Cell Name: lamp5 GABAergic cortical interneuron (CL4023011)
    Fold Change: 2.52
    Marker Score: 37,612
  • Cell Name: vip GABAergic cortical interneuron (CL4023016)
    Fold Change: 2.51
    Marker Score: 95,300
  • Cell Name: OFF retinal ganglion cell (CL4023033)
    Fold Change: 2.5
    Marker Score: 1,048
  • Cell Name: regular ventricular cardiac myocyte (CL0002131)
    Fold Change: 2.47
    Marker Score: 55,228
  • Cell Name: type II pneumocyte (CL0002063)
    Fold Change: 2.43
    Marker Score: 15,814
  • Cell Name: peripheral nervous system neuron (CL2000032)
    Fold Change: 2.41
    Marker Score: 2,709
  • Cell Name: sncg GABAergic cortical interneuron (CL4023015)
    Fold Change: 2.4
    Marker Score: 18,377
  • Cell Name: pulmonary interstitial fibroblast (CL0002241)
    Fold Change: 2.34
    Marker Score: 1,872
  • Cell Name: pvalb GABAergic cortical interneuron (CL4023018)
    Fold Change: 2.33
    Marker Score: 86,113
  • Cell Name: neural crest cell (CL0011012)
    Fold Change: 2.31
    Marker Score: 2,472
  • Cell Name: caudal ganglionic eminence derived GABAergic cortical interneuron (CL4023070)
    Fold Change: 2.3
    Marker Score: 8,894
  • Cell Name: epithelial cell of nephron (CL1000449)
    Fold Change: 2.25
    Marker Score: 4,693
  • Cell Name: oligodendrocyte precursor cell (CL0002453)
    Fold Change: 2.24
    Marker Score: 2,770
  • Cell Name: primary sensory neuron (sensu Teleostei) (CL0000531)
    Fold Change: 2.22
    Marker Score: 747
  • Cell Name: syncytiotrophoblast cell (CL0000525)
    Fold Change: 2.21
    Marker Score: 1,816
  • Cell Name: basal epithelial cell of prostatic duct (CL0002236)
    Fold Change: 2.2
    Marker Score: 1,955
  • Cell Name: migratory enteric neural crest cell (CL0002607)
    Fold Change: 2.19
    Marker Score: 2,061
  • Cell Name: near-projecting glutamatergic cortical neuron (CL4023012)
    Fold Change: 2.16
    Marker Score: 20,292
  • Cell Name: astrocyte (CL0000127)
    Fold Change: 2.13
    Marker Score: 1,850
  • Cell Name: neuroblast (sensu Vertebrata) (CL0000031)
    Fold Change: 2.12
    Marker Score: 1,329
  • Cell Name: Sertoli cell (CL0000216)
    Fold Change: 2.07
    Marker Score: 12,294
  • Cell Name: L2/3-6 intratelencephalic projecting glutamatergic neuron (CL4023040)
    Fold Change: 2.07
    Marker Score: 127,181
  • Cell Name: neural cell (CL0002319)
    Fold Change: 2.06
    Marker Score: 993
  • Cell Name: retinal ganglion cell (CL0000740)
    Fold Change: 2.04
    Marker Score: 2,541
  • Cell Name: neuron (CL0000540)
    Fold Change: 2
    Marker Score: 8,151
  • Cell Name: granulosa cell (CL0000501)
    Fold Change: 1.98
    Marker Score: 19,950
  • Cell Name: inhibitory motor neuron (CL0008015)
    Fold Change: 1.96
    Marker Score: 926
  • Cell Name: regular atrial cardiac myocyte (CL0002129)
    Fold Change: 1.96
    Marker Score: 6,966
  • Cell Name: cell in vitro (CL0001034)
    Fold Change: 1.96
    Marker Score: 67,760
  • Cell Name: dopaminergic neuron (CL0000700)
    Fold Change: 1.95
    Marker Score: 20,112
  • Cell Name: pneumocyte (CL0000322)
    Fold Change: 1.91
    Marker Score: 3,068
  • Cell Name: epithelial cell of alveolus of lung (CL0010003)
    Fold Change: 1.91
    Marker Score: 855
  • Cell Name: kidney distal convoluted tubule epithelial cell (CL1000849)
    Fold Change: 1.89
    Marker Score: 2,005
  • Cell Name: motor neuron (CL0000100)
    Fold Change: 1.89
    Marker Score: 1,122
  • Cell Name: ovarian surface epithelial cell (CL2000064)
    Fold Change: 1.89
    Marker Score: 5,131
  • Cell Name: ON retinal ganglion cell (CL4023032)
    Fold Change: 1.86
    Marker Score: 507
  • Cell Name: hepatoblast (CL0005026)
    Fold Change: 1.85
    Marker Score: 6,076
  • Cell Name: corticothalamic-projecting glutamatergic cortical neuron (CL4023013)
    Fold Change: 1.84
    Marker Score: 17,444
  • Cell Name: kidney loop of Henle thin ascending limb epithelial cell (CL1001107)
    Fold Change: 1.83
    Marker Score: 1,856
  • Cell Name: CNS interneuron (CL0000402)
    Fold Change: 1.82
    Marker Score: 876
  • Cell Name: GABAergic interneuron (CL0011005)
    Fold Change: 1.78
    Marker Score: 685
  • Cell Name: kidney loop of Henle thick ascending limb epithelial cell (CL1001106)
    Fold Change: 1.76
    Marker Score: 4,721
  • Cell Name: corneal epithelial cell (CL0000575)
    Fold Change: 1.74
    Marker Score: 1,924
  • Cell Name: Unknown (CL0002371)
    Fold Change: 1.71
    Marker Score: 1,816
  • Cell Name: preosteoblast (CL0007010)
    Fold Change: 1.7
    Marker Score: 483
  • Cell Name: kidney cell (CL1000497)
    Fold Change: 1.69
    Marker Score: 1,125
  • Cell Name: mesenchymal cell (CL0008019)
    Fold Change: 1.69
    Marker Score: 2,865
  • Cell Name: acinar cell of salivary gland (CL0002623)
    Fold Change: 1.68
    Marker Score: 3,833
  • Cell Name: ganglion interneuron (CL0000397)
    Fold Change: 1.65
    Marker Score: 502
  • Cell Name: L6b glutamatergic cortical neuron (CL4023038)
    Fold Change: 1.65
    Marker Score: 14,147
  • Cell Name: L5 extratelencephalic projecting glutamatergic cortical neuron (CL4023041)
    Fold Change: 1.62
    Marker Score: 2,503
  • Cell Name: glial cell (CL0000125)
    Fold Change: 1.58
    Marker Score: 1,741
  • Cell Name: respiratory epithelial cell (CL0002368)
    Fold Change: 1.58
    Marker Score: 868
  • Cell Name: epithelial cell of prostate (CL0002231)
    Fold Change: 1.55
    Marker Score: 1,075
  • Cell Name: epithelial cell of lung (CL0000082)
    Fold Change: 1.5
    Marker Score: 7,894
  • Cell Name: pancreatic ductal cell (CL0002079)
    Fold Change: 1.48
    Marker Score: 1,536
  • Cell Name: type A enteroendocrine cell (CL0002067)
    Fold Change: 1.46
    Marker Score: 590
  • Cell Name: kidney loop of Henle thin descending limb epithelial cell (CL1001111)
    Fold Change: 1.46
    Marker Score: 1,575
  • Cell Name: Schwann cell (CL0002573)
    Fold Change: 1.46
    Marker Score: 506
  • Cell Name: mural cell (CL0008034)
    Fold Change: 1.46
    Marker Score: 167,030
  • Cell Name: cardiac endothelial cell (CL0010008)
    Fold Change: 1.44
    Marker Score: 2,726
  • Cell Name: GABAergic amacrine cell (CL4030027)
    Fold Change: 1.42
    Marker Score: 2,882

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Cell ID: Standard Cell Ontology term used for mapping and comparing cells across experiments. Ensures consistency in analyzing cellular functions across tissues.
Fold Change: Represents the ratio of the current Marker Score to the Marker Score Threshold, indicating how much the gene expression has changed compared to a baseline.
Marker Score: Reflects how strongly a gene is expressed in this cell type. Calculated using techniques like effect size estimation and bootstrapping for reliability.

Other Information

**Key Characteristics:** 1. **Cell adhesion molecule**: CADM1 is a member of the immunoglobulin superfamily and is primarily expressed on the surface of cells, where it interacts with other adhesion molecules to facilitate cell-cell adhesion. 2. **Widespread expression**: CADM1 is expressed in various cell types, including immune cells (e.g., T cells, natural killer cells), neurons, epithelial cells, and chromaffin cells. 3. **Adherens junction formation**: CADM1 is involved in the formation and maintenance of adherens junctions, which are critical for maintaining tissue structure and function. 4. **Signaling and immune regulation**: CADM1 modulates immune responses by regulating the activity of immune cells, such as T cells and natural killer cells. **Pathways and Functions:** 1. **Activated T cell proliferation**: CADM1 interacts with CD2 and CD103 to regulate T cell activation and proliferation. 2. **Adherens junction interactions**: CADM1 forms heterophilic and homophilic interactions with other adhesion molecules, such as N-cadherin and E-cadherin, to maintain adherens junctions. 3. **Apoptotic process**: CADM1 can regulate apoptosis by interacting with pro-apoptotic and anti-apoptotic proteins. 4. **Cell-cell communication**: CADM1 participates in cell-cell communication by modulating the activity of immune cells and other cell types. 5. **Immune regulation**: CADM1 regulates immune responses by modulating the activity of immune cells, such as T cells, natural killer cells, and dendritic cells. **Clinical Significance:** 1. **Immunodeficiency disorders**: Mutations in CADM1 have been associated with immunodeficiency disorders, such as X-linked lymphoproliferative disease. 2. **Cancer**: CADM1 is overexpressed in certain types of cancer, including leukemia and lymphoma, and may contribute to tumor progression. 3. **Neurological disorders**: CADM1 has been implicated in the pathogenesis of neurological disorders, such as Alzheimer's disease and Parkinson's disease. 4. **Infectious diseases**: CADM1 plays a role in the regulation of immune responses to infectious diseases, such as HIV and tuberculosis. In conclusion, CADM1 is a multifaceted protein involved in various cellular processes, including cell-cell adhesion, signaling, and immune responses. Its expression is widespread in different cell types, and its dysregulation has been implicated in various diseases, including immunodeficiency disorders, cancer, and neurological disorders. Further research is needed to elucidate the complex mechanisms by which CADM1 regulates immune responses and to explore its potential as a therapeutic target.

Genular Protein ID: 1414544872

Symbol: CADM1_HUMAN

Name: Immunoglobulin superfamily member 4

UniProtKB Accession Codes:

Q9BY67 A4FVB5 F5H0J4 H0YGA7 H1ZZV9 H1ZZW1 H1ZZW2 Q86WB8 Q8N2F4 X5D2C8

Database IDs:

ABCD 1 AGR 1 AlphaFoldDB 1 Antibodypedia 1 Bgee 1 BioGRID 1 BioGRID-ORCS 1 BioMuta 1 CCDS 4 CDD 2 CORUM 1 CPTAC 3 CPTC 1 CTD 1 ChiTaRS 1 DIP 1 DMDM 1 DNASU 1 DisGeNET 1 EMBL 18 EPD 1 Ensembl 4 EvolutionaryTrace 1 ExpressionAtlas 1 GO 25 Gene3D 1 GeneCards 1 GeneTree 1 GeneWiki 1 Genevisible 1 GenomeRNAi 1 GlyConnect 1 GlyCosmos 1 GlyGen 1 HGNC 2 HPA 1 InParanoid 1 IntAct 1 InterPro 8 KEGG 1 MANE-Select 1 MIM 1 MINT 1 MassIVE 1 MaxQB 1 NCBI Taxonomy 1 OMA 1 OpenTargets 1 OrthoDB 1 PANTHER 2 PDB 5 PDBsum 2 PRO 1 PROSITE 1 PROSITE-ProRule 1 PathwayCommons 1 PaxDb 1 PeptideAtlas 1 Pfam 3 PharmGKB 1 Pharos 1 PhosphoSitePlus 1 PhylomeDB 1 Proteomes 1 ProteomicsDB 4 Pumba 1 RNAct 1 Reactome 2 RefSeq 5 SIGNOR 1 SMART 3 SMR 1 STRING 1 SUPFAM 1 SignaLink 1 TreeFam 1 UCSC 1 UniProtKB 2 VEuPathDB 1 eggNOG 1 iPTMnet 1 jPOST 1 neXtProt 1

Citations:

PubMed ID: 15893517

Title: Nectin-like molecule 1 is a protein 4.1N associated protein and recruits protein 4.1N from cytoplasm to the plasma membrane.

PubMed ID: 15893517

DOI: 10.1016/j.bbamem.2005.01.013

PubMed ID: 22438059

Title: CADM1 isoforms differentially regulate human mast cell survival and homotypic adhesion.

PubMed ID: 22438059

DOI: 10.1007/s00018-012-0948-y

PubMed ID: 24722188

Title: Protein interaction network of alternatively spliced isoforms from brain links genetic risk factors for autism.

PubMed ID: 24722188

DOI: 10.1038/ncomms4650

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 16554811

Title: Human chromosome 11 DNA sequence and analysis including novel gene identification.

PubMed ID: 16554811

DOI: 10.1038/nature04632

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 11279526

Title: TSLC1 is a tumor-suppressor gene in human non-small-cell lung cancer.

PubMed ID: 11279526

DOI: 10.1038/86934

PubMed ID: 12234973

Title: Direct association of TSLC1 and DAL-1, two distinct tumor suppressor proteins in lung cancer.

PubMed ID: 12234973

PubMed ID: 12050160

Title: The tumor suppressor protein TSLC1 is involved in cell-cell adhesion.

PubMed ID: 12050160

DOI: 10.1074/jbc.m203620200

PubMed ID: 14633730

Title: The cytoplasmic domain is critical to the tumor suppressor activity of TSLC1 in non-small cell lung cancer.

PubMed ID: 14633730

PubMed ID: 12925956

Title: Promoter methylation of the TSLC1 gene in advanced lung tumors and various cancer cell lines.

PubMed ID: 12925956

DOI: 10.1002/ijc.11348

PubMed ID: 12920246

Title: Expression of the TSLC1 adhesion molecule in pulmonary epithelium and its down-regulation in pulmonary adenocarcinoma other than bronchioloalveolar carcinoma.

PubMed ID: 12920246

DOI: 10.1097/01.lab.0000081391.28136.80

PubMed ID: 13679854

Title: Association of a lung tumor suppressor TSLC1 with MPP3, a human homologue of Drosophila tumor suppressor Dlg.

PubMed ID: 13679854

DOI: 10.1038/sj.onc.1206744

PubMed ID: 15184878

Title: Re-expression of TSLC1 in a non-small-cell lung cancer cell line induces apoptosis and inhibits tumor growth.

PubMed ID: 15184878

DOI: 10.1038/sj.onc.1207756

PubMed ID: 15811952

Title: The tumor suppressor TSLC1/NECL-2 triggers NK-cell and CD8+ T-cell responses through the cell-surface receptor CRTAM.

PubMed ID: 15811952

DOI: 10.1182/blood-2005-02-0817

PubMed ID: 15781451

Title: Nectin-like protein 2 defines a subset of T-cell zone dendritic cells and is a ligand for class-I-restricted T-cell-associated molecule.

PubMed ID: 15781451

DOI: 10.1074/jbc.m502095200

PubMed ID: 15905536

Title: The spermatogenic Ig superfamily/synaptic cell adhesion molecule mast-cell adhesion molecule promotes interaction with nerves.

PubMed ID: 15905536

DOI: 10.4049/jimmunol.174.11.6934

PubMed ID: 16335952

Title: Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry.

PubMed ID: 16335952

DOI: 10.1021/pr0502065

PubMed ID: 19159218

Title: Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry.

PubMed ID: 19159218

DOI: 10.1021/pr8008012

PubMed ID: 19349973

Title: Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins.

PubMed ID: 19349973

DOI: 10.1038/nbt.1532

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 24503895

Title: Trans-homophilic interaction of CADM1 activates PI3K by forming a complex with MAGuK-family proteins MPP3 and Dlg.

PubMed ID: 24503895

DOI: 10.1371/journal.pone.0082894

PubMed ID: 25268382

Title: Trans-homophilic interaction of CADM1 activates PI3K by forming a complex with MAGuK-family proteins MPP3 and Dlg.

PubMed ID: 25268382

DOI: 10.1371/journal.pone.0110062

PubMed ID: 29698475

Title: CADM1 is essential for KSHV-encoded vGPCR-and vFLIP-mediated chronic NF-kappaB activation.

PubMed ID: 29698475

DOI: 10.1371/journal.ppat.1006968

PubMed ID: 21131357

Title: Structural basis of tumor suppressor in lung cancer 1 (TSLC1) binding to differentially expressed in adenocarcinoma of the lung (DAL-1/4.1B).

PubMed ID: 21131357

DOI: 10.1074/jbc.m110.174011

PubMed ID: 23871486

Title: Competition of cell adhesion and immune recognition: insights into the interaction between CRTAM and nectin-like 2.

PubMed ID: 23871486

DOI: 10.1016/j.str.2013.06.006

Sequence Information:

  • Length: 442
  • Mass: 48509
  • Checksum: CDEDE1E0C08BDD3A
  • Sequence:
    • MASVVLPSGS QCAAAAAAAA PPGLRLRLLL LLFSAAALIP TGDGQNLFTK DVTVIEGEVA 
TISCQVNKSD DSVIQLLNPN RQTIYFRDFR PLKDSRFQLL NFSSSELKVS LTNVSISDEG 
RYFCQLYTDP PQESYTTITV LVPPRNLMID IQKDTAVEGE EIEVNCTAMA SKPATTIRWF 
KGNTELKGKS EVEEWSDMYT VTSQLMLKVH KEDDGVPVIC QVEHPAVTGN LQTQRYLEVQ 
YKPQVHIQMT YPLQGLTREG DALELTCEAI GKPQPVMVTW VRVDDEMPQH AVLSGPNLFI 
NNLNKTDNGT YRCEASNIVG KAHSDYMLYV YDPPTTIPPP TTTTTTTTTT TTTILTIITD 
SRAGEEGSIR AVDHAVIGGV VAVVVFAMLC LLIILGRYFA RHKGTYFTHE AKGADDAADA 
DTAIINAEGG QNNSEEKKEY FI

Genular Protein ID: 1335912452

Symbol: X5D7A8_HUMAN

Name: N/A

UniProtKB Accession Codes:

X5D7A8

Database IDs:

ARBA 4 AlphaFoldDB 1 Antibodypedia 1 BioGRID-ORCS 1 CDD 2 CTD 1 ChiTaRS 1 DNASU 1 EMBL 2 ExpressionAtlas 1 GO 7 Gene3D 1 GenomeRNAi 1 InterPro 8 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PROSITE 2 Pfam 3 PhylomeDB 1 RefSeq 1 SAM 2 SMART 3 SMR 1 SUPFAM 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 24722188

Title: Protein interaction network of alternatively spliced isoforms from brain links genetic risk factors for autism.

PubMed ID: 24722188

Sequence Information:

  • Length: 471
  • Mass: 51533
  • Checksum: 322A71AB89E8B21F
  • Sequence:
    • MASVVLPSGS QCAAAAAAAA PPGLRLRLLL LLFSAAALIP TGDGQNLFTK DVTVIEGEVA 
TISCQVNKSD DSVIQLLNPN RQTIYFRDFR PLKDSRFQLL NFSSSELKVS LTNVSISDEG 
RYFCQLYTDP PQESYTTITV LVPPRNLMID IQKDTAVEGE EIEVNCTAMA SKPATTIRWF 
KGNTELKGKS EVEEWSDMYT VTSQLMLKVH KEDDGVPVIC QVEHPAVTGN LQTQRYLEVQ 
YKPQVHIQMT YPLQGLTREG DALELTCEAI GKPQPVMVTW VRVDDEMPQH AVLSGPNLFI 
NNLNKTDNGT YRCEASNIVG KAHSDYMLYV YDPPTTIPPP TTTTTTTTTT TTTILTIITD 
TTATTEPAVH GLTQLPNSAE ELDSEDLSDS RAGEEGSIRA VDHAVIGGVV AVVVFAMLCL 
LIILGRYFAR HKGTYFTHEA KGADDAADAD TAIINAEGGQ NNSEEKKEYF I

Genular Protein ID: 2236495632

Symbol: A0A4Z1_HUMAN

Name: N/A

UniProtKB Accession Codes:

A0A4Z1

Database IDs:

ARBA 3 AlphaFoldDB 1 BioGRID-ORCS 1 CDD 2 CPTAC 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 2 GO 1 Gene3D 1 GenomeRNAi 1 InterPro 7 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PROSITE 2 Pfam 3 RefSeq 3 SAM 2 SMART 2 SMR 1 SUPFAM 1

Citations:

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

Sequence Information:

  • Length: 387
  • Mass: 42737
  • Checksum: DD39294F7D4DE3AE
  • Sequence:
    • MASVVLPSGS QCAAAAAAAA PPGLRLRLLL LLFSAAALIP TGDGQNLFTK DVTVIEGEVA 
TISCQVNKSD DSVIQLLNPN RQTIYFRDFR PLKDSRFQLL NFSSSELKVS LTNVSISDEG 
RYFCQLYTDP PQESYTTITV LVPPRNLMID IQKDTAVEGE EIEVNCTAMA SKPATTIRWF 
KGNTELKGKS EVEEWSDMYT VTSQLMLKVH KEDDGVPVIC QVEHPAVTGN LQTQRYLEVQ 
YKPQVHIQMT YPLQGLTREG DALELTCEAI GKPQPVMVTW VRVDDEMPQH AVLSGPNLFI 
NNLNKTDNGT YRCEASNIVG KAHSDYMLYV YDSRAGEEGS IRAVDHAVIG GVVAVVVFAM 
LCLLIILGRY FARHKGLFSL TSSPRIK

Genular Protein ID: 3221701262

Symbol: X5DQR8_HUMAN

Name: N/A

UniProtKB Accession Codes:

X5DQR8

Database IDs:

ARBA 4 AlphaFoldDB 1 Antibodypedia 1 BioGRID-ORCS 1 CDD 2 CTD 1 ChiTaRS 1 DNASU 1 EMBL 2 ExpressionAtlas 1 GO 1 Gene3D 1 GenomeRNAi 1 InterPro 8 MaxQB 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PROSITE 2 Pfam 3 RefSeq 1 SAM 2 SMART 3 SMR 1 SUPFAM 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 24722188

Title: Protein interaction network of alternatively spliced isoforms from brain links genetic risk factors for autism.

PubMed ID: 24722188

Sequence Information:

  • Length: 453
  • Mass: 49633
  • Checksum: 466DC2D374481CFB
  • Sequence:
    • MASVVLPSGS QCAAAAAAAA PPGLRLRLLL LLFSAAALIP TGDGQNLFTK DVTVIEGEVA 
TISCQVNKSD DSVIQLLNPN RQTIYFRDFR PLKDSRFQLL NFSSSELKVS LTNVSISDEG 
RYFCQLYTDP PQESYTTITV LVPPRNLMID IQKDTAVEGE EIEVNCTAMA SKPATTIRWF 
KGNTELKGKS EVEEWSDMYT VTSQLMLKVH KEDDGVPVIC QVEHPAVTGN LQTQRYLEVQ 
YKPQVHIQMT YPLQGLTREG DALELTCEAI GKPQPVMVTW VRVDDEMPQH AVLSGPNLFI 
NNLNKTDNGT YRCEASNIVG KAHSDYMLYV YDPPTTIPPP TTTTTTTTTT TTTILTIITD 
TTATTEPAVH DSRAGEEGSI RAVDHAVIGG VVAVVVFAML CLLIILGRYF ARHKGTYFTH 
EAKGADDAAD ADTAIINAEG GQNNSEEKKE YFI

Genular Protein ID: 3554014961

Symbol: X5DQS5_HUMAN

Name: N/A

UniProtKB Accession Codes:

X5DQS5

Database IDs:

ARBA 4 Antibodypedia 1 Bgee 1 BioGRID-ORCS 1 CDD 2 CTD 1 ChiTaRS 1 DNASU 1 EMBL 9 EPD 1 Ensembl 2 GO 1 Gene3D 1 GeneTree 1 GenomeRNAi 1 HGNC 1 InterPro 8 MassIVE 1 MaxQB 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PROSITE 2 Pfam 3 Proteomes 2 RefSeq 1 SAM 2 SMART 3 SUPFAM 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 16554811

Title: Human chromosome 11 DNA sequence and analysis including novel gene identification.

PubMed ID: 16554811

DOI: 10.1038/nature04632

PubMed ID: 21269460

Title: Initial characterization of the human central proteome.

PubMed ID: 21269460

DOI: 10.1186/1752-0509-5-17

PubMed ID: 24722188

Title: Protein interaction network of alternatively spliced isoforms from brain links genetic risk factors for autism.

PubMed ID: 24722188

Sequence Information:

  • Length: 443
  • Mass: 48648
  • Checksum: 046B43AA156F6F64
  • Sequence:
    • MASVVLPSGS QCAAAAAAAA PPGLRLRLLL LLFSAAALIP TGDGQNLFTK DVTVIEGEVA 
TISCQVNKSD DSVIQLLNPN RQTIYFRDFR PLKDSRFQLL NFSSSELKVS LTNVSISDEG 
RYFCQLYTDP PQESYTTITV LVPPRNLMID IQKDTAVEGE EIEVNCTAMA SKPATTIRWF 
KGNTELKGKS EVEEWSDMYT VTSQLMLKVH KEDDGVPVIC QVEHPAVTGN LQTQRYLEVQ 
YKPQVHIQMT YPLQGLTREG DALELTCEAI GKPQPVMVTW VRVDDEMPQH AVLSGPNLFI 
NNLNKTDNGT YRCEASNIVG KAHSDYMLYV YDTTATTEPA VHGLTQLPNS AEELDSEDLS 
DSRAGEEGSI RAVDHAVIGG VVAVVVFAML CLLIILGRYF ARHKGTYFTH EAKGADDAAD 
ADTAIINAEG GQNNSEEKKE YFI

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.