Genular: Defining Cellular Identity and Function

Details for: Rara

Gene ID: 24705

Symbol: Rara

Ensembl ID: ENSRNOG00000009972

Description: retinoic acid receptor, alpha

Associated with

Developmental biology
(R-RNO-1266738)
Gene expression (transcription)
(R-RNO-74160)
Generic transcription pathway
(R-RNO-212436)
Metabolism of proteins
(R-RNO-392499)
Nuclear receptor transcription pathway
(R-RNO-383280)
Post-translational protein modification
(R-RNO-597592)
Rna polymerase ii transcription
(R-RNO-73857)
Signaling by nuclear receptors
(R-RNO-9006931)
Signaling by retinoic acid
(R-RNO-5362517)
Signal transduction
(R-RNO-162582)
Sumo e3 ligases sumoylate target proteins
(R-RNO-3108232)
Sumoylation
(R-RNO-2990846)
Sumoylation of intracellular receptors
(R-RNO-4090294)
Transcriptional regulation of granulopoiesis
(R-RNO-9616222)
Alpha-actinin binding
(GO:0051393)
Apoptotic cell clearance
(GO:0043277)
Bone development
(GO:0060348)
Cell differentiation
(GO:0030154)
Cellular response to lipopolysaccharide
(GO:0071222)
Cellular response to retinoic acid
(GO:0071300)
Chondroblast differentiation
(GO:0060591)
Chromatin binding
(GO:0003682)
Chromatin dna binding
(GO:0031490)
Dna-binding transcription factor activity
(GO:0003700)
Dna-binding transcription repressor activity
(GO:0001217)
Dna binding
(GO:0003677)
Embryonic camera-type eye development
(GO:0031076)
Enzyme binding
(GO:0019899)
Face development
(GO:0060324)
Female pregnancy
(GO:0007565)
Germ cell development
(GO:0007281)
Glandular epithelial cell development
(GO:0002068)
Growth plate cartilage development
(GO:0003417)
Heterocyclic compound binding
(GO:1901363)
Hippocampus development
(GO:0021766)
Histone deacetylase binding
(GO:0042826)
Hormone-mediated signaling pathway
(GO:0009755)
Limb development
(GO:0060173)
Liver development
(GO:0001889)
Male gonad development
(GO:0008584)
Mrna 5'-utr binding
(GO:0048027)
Mrna regulatory element binding translation repressor activity
(GO:0000900)
Mrna transcription by rna polymerase ii
(GO:0042789)
Multicellular organism growth
(GO:0035264)
Negative regulation of apoptotic process
(GO:0043066)
Negative regulation of cartilage development
(GO:0061037)
Negative regulation of cell differentiation
(GO:0045596)
Negative regulation of cell population proliferation
(GO:0008285)
Negative regulation of dna-templated transcription
(GO:0045892)
Negative regulation of gene expression
(GO:0010629)
Negative regulation of granulocyte differentiation
(GO:0030853)
Negative regulation of transcription by rna polymerase ii
(GO:0000122)
Negative regulation of translation
(GO:0017148)
Negative regulation of translational initiation
(GO:0045947)
Negative regulation of tumor necrosis factor production
(GO:0032720)
Negative regulation of type ii interferon production
(GO:0032689)
Neural tube closure
(GO:0001843)
Nuclear receptor activity
(GO:0004879)
Outflow tract septum morphogenesis
(GO:0003148)
Positive regulation of cell cycle
(GO:0045787)
Positive regulation of cell population proliferation
(GO:0008284)
Positive regulation of dna-templated transcription
(GO:0045893)
Positive regulation of gene expression
(GO:0010628)
Positive regulation of interleukin-4 production
(GO:0032753)
Positive regulation of interleukin-5 production
(GO:0032754)
Positive regulation of interleukin-13 production
(GO:0032736)
Positive regulation of neuron differentiation
(GO:0045666)
Positive regulation of t-helper 2 cell differentiation
(GO:0045630)
Positive regulation of transcription by rna polymerase ii
(GO:0045944)
Prostate gland development
(GO:0030850)
Protein domain specific binding
(GO:0019904)
Protein kinase a binding
(GO:0051018)
Protein kinase b binding
(GO:0043422)
Regulation of apoptotic process
(GO:0042981)
Regulation of dna-templated transcription
(GO:0006355)
Regulation of granulocyte differentiation
(GO:0030852)
Regulation of myelination
(GO:0031641)
Regulation of synaptic plasticity
(GO:0048167)
Response to cytokine
(GO:0034097)
Response to estradiol
(GO:0032355)
Response to ethanol
(GO:0045471)
Response to retinoic acid
(GO:0032526)
Response to vitamin a
(GO:0033189)
Retinoic acid-responsive element binding
(GO:0044323)
Retinoic acid binding
(GO:0001972)
Retinoic acid receptor signaling pathway
(GO:0048384)
Rna polymerase ii cis-regulatory region sequence-specific dna binding
(GO:0000978)
Rna polymerase ii transcription regulatory region sequence-specific dna binding
(GO:0000977)
Sequence-specific dna binding
(GO:0043565)
Sequence-specific double-stranded dna binding
(GO:1990837)
Sertoli cell fate commitment
(GO:0060010)
Signaling receptor binding
(GO:0005102)
Spermatogenesis
(GO:0007283)
Trachea cartilage development
(GO:0060534)
Transcription cis-regulatory region binding
(GO:0000976)
Transcription coactivator binding
(GO:0001223)
Ureteric bud development
(GO:0001657)
Ventricular cardiac muscle cell differentiation
(GO:0055012)
Zinc ion binding
(GO:0008270)

Other Information

Proteins

A6HIV9_RAT
A6HIV8_RAT

Genular Protein ID: 1867357407

Symbol: A6HIV9_RAT

Name: N/A

UniProtKB Accession Codes:

A6HIV9 Q499N1

Database IDs:

Citations:

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 15057822

Title: Genome sequence of the Brown Norway rat yields insights into mammalian evolution.

PubMed ID: 15057822

DOI: 10.1038/nature02426

Sequence Information:

Length: 459
Mass: 50949
Checksum: 066A556C10E57D78
Sequence:

MYESVEVGGL APAPNPFLVV DFYNQNRACL LQEKGLPAPG PYSTPLRTPL WNGSNHSIET 
QSSSSEEIVP SPPSPPPLPR IYKPCFVCQD KSSGYHYGVS ACEGCKGFFR RSIQKNMVYT 
CHRDKNCIIN KVTRNRCQYC RLQKCFEVGM SKESVRNDRN KKKKETPKPE CSESYTLTPE 
VGELIEKVRK AHQETFPALC QLGKYTTNNS SEQRVSLDID LWDKFSELST KCIIKTVEFA 
KQLPGFTTLT IADQITLLKA ACLDILILRI CTRYTPEQDT MTFSDGLTLN RTQMHNAGFG 
PLTDLVFAFA NQLLPLEMDD AETGLLSAIC LICGDRQDLE QPDKVDMLQE PLLEALKVYV 
RKRRPSRPHM FPKMLMKITD LRSISAKGAE RVITLKMEIP GSMPPLIQEM LENSEGLDTL 
SGQSGGGTRD GGGLAPPPGS CSPSLSPSSH RSSPATQSP

Genular Protein ID: 4077957558

Symbol: A6HIV8_RAT

Name: N/A

UniProtKB Accession Codes:

A6HIV8

Database IDs:

Citations:

PubMed ID: 15632090

Title: Gene and alternative splicing annotation with AIR.

PubMed ID: 15632090

DOI: 10.1101/gr.2889405

Sequence Information:

Length: 462
Mass: 50779
Checksum: D3C182992D783376
Sequence:

MASNSSSCPT PGGGHLNGYP VPPYAFFFPP MLGGLSPPGA LTSLQHQLPV SGYSTPSPAT 
IETQSSSSEE IVPSPPSPPP LPRIYKPCFV CQDKSSGYHY GVSACEGCKG FFRRSIQKNM 
VYTCHRDKNC IINKVTRNRC QYCRLQKCFE VGMSKESVRN DRNKKKKETP KPECSESYTL 
TPEVGELIEK VRKAHQETFP ALCQLGKYTT NNSSEQRVSL DIDLWDKFSE LSTKCIIKTV 
EFAKQLPGFT TLTIADQITL LKAACLDILI LRICTRYTPE QDTMTFSDGL TLNRTQMHNA 
GFGPLTDLVF AFANQLLPLE MDDAETGLLS AICLICGDRQ DLEQPDKVDM LQEPLLEALK 
VYVRKRRPSR PHMFPKMLMK ITDLRSISAK GAERVITLKM EIPGSMPPLI QEMLENSEGL 
DTLSGQSGGG TRDGGGLAPP PGSCSPSLSP SSHRSSPATQ SP

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.