Genular: Defining Cellular Identity and Function

Details for: Rho

Gene ID: 24717

Symbol: Rho

Ensembl ID: ENSRNOG00000011144

Description: rhodopsin

Associated with

Activation of the phototransduction cascade
(R-RNO-2485179)
Cargo trafficking to the periciliary membrane
(R-RNO-5620920)
Cilium assembly
(R-RNO-5617833)
Class a/1 (rhodopsin-like receptors)
(R-RNO-373076)
G alpha (i) signalling events
(R-RNO-418594)
Gpcr downstream signalling
(R-RNO-388396)
Gpcr ligand binding
(R-RNO-500792)
Inactivation, recovery and regulation of the phototransduction cascade
(R-RNO-2514859)
Opsins
(R-RNO-419771)
Organelle biogenesis and maintenance
(R-RNO-1852241)
Sensory perception
(R-RNO-9709957)
Signaling by gpcr
(R-RNO-372790)
Signal transduction
(R-RNO-162582)
The canonical retinoid cycle in rods (twilight vision)
(R-RNO-2453902)
The phototransduction cascade
(R-RNO-2514856)
Visual phototransduction
(R-RNO-2187338)
Vxpx cargo-targeting to cilium
(R-RNO-5620916)
11-cis retinal binding
(GO:0005502)
Absorption of visible light
(GO:0016038)
Adaptation of rhodopsin mediated signaling
(GO:0016062)
Cell-cell junction
(GO:0005911)
Cellular response to light stimulus
(GO:0071482)
Detection of light stimulus
(GO:0009583)
Detection of temperature stimulus involved in thermoception
(GO:0050960)
Gene expression
(GO:0010467)
Golgi apparatus
(GO:0005794)
G protein-coupled photoreceptor activity
(GO:0008020)
G protein-coupled receptor activity
(GO:0004930)
G protein-coupled receptor signaling pathway
(GO:0007186)
Membrane
(GO:0016020)
Metal ion binding
(GO:0046872)
Microtubule cytoskeleton organization
(GO:0000226)
Photoreceptor activity
(GO:0009881)
Photoreceptor cell maintenance
(GO:0045494)
Photoreceptor disc membrane
(GO:0097381)
Photoreceptor inner segment
(GO:0001917)
Photoreceptor inner segment membrane
(GO:0060342)
Photoreceptor outer segment
(GO:0001750)
Photoreceptor outer segment membrane
(GO:0042622)
Phototransduction
(GO:0007602)
Plasma membrane
(GO:0005886)
Podosome assembly
(GO:0071800)
Red, far-red light phototransduction
(GO:0009585)
Response to light intensity
(GO:0009642)
Response to light stimulus
(GO:0009416)
Retina development in camera-type eye
(GO:0060041)
Retinal binding
(GO:0016918)
Rhodopsin mediated signaling pathway
(GO:0016056)
Rod bipolar cell differentiation
(GO:1904389)
Rod photoreceptor outer segment
(GO:0120200)
Rough endoplasmic reticulum membrane
(GO:0030867)
Sensory perception of light stimulus
(GO:0050953)
Spectrin binding
(GO:0030507)
Sperm head plasma membrane
(GO:1990913)
Sperm midpiece
(GO:0097225)
Thermotaxis
(GO:0043052)
Visual perception
(GO:0007601)

Other Information

Proteins

Rhodopsin
A6IL03_RAT

Genular Protein ID: 2588355638

Symbol: OPSD_RAT

Name: Rhodopsin

UniProtKB Accession Codes:

P51489

Database IDs:

Citations:

PubMed ID: 7654522

Title: Isolation and coding sequence of the rat rod opsin gene.

PubMed ID: 7654522

DOI: 10.1007/bf02736734

Sequence Information:

Length: 348
Mass: 39042
Checksum: DA0F3F90C30984BC
Sequence:

MNGTEGPNFY VPFSNITGVV RSPFEQPQYY LAEPWQFSML AAYMFLLIVL GFPINFLTLY 
VTVQHKKLRT PLNYILLNLA VADLFMVFGG FTTTLYTSLH GYFVFGPTGC NLEGFFATLG 
GEIGLWSLVV LAIERYVVVC KPMSNFRFGE NHAIMGVAFT WVMALACAAP PLVGWSRYIP 
EGMQCSCGID YYTLKPEVNN ESFVIYMFVV HFTIPMIVIF FCYGQLVFTV KEAAAQQQES 
ATTQKAEKEV TRMVIIMVIF FLICWLPYAS VAMYIFTHQG SNFGPIFMTL PAFFAKTASI 
YNPIIYIMMN KQFRNCMLTS LCCGKNPLGD DEASATASKT ETSQVAPA

Genular Protein ID: 1747006191

Symbol: A6IL03_RAT

Name: N/A

UniProtKB Accession Codes:

A6IL03

Database IDs:

Citations:

PubMed ID: 15632090

Title: Gene and alternative splicing annotation with AIR.

PubMed ID: 15632090

DOI: 10.1101/gr.2889405

Sequence Information:

Length: 348
Mass: 39056
Checksum: DA0F3F90C479F3BC
Sequence:

MNGTEGPNFY VPFSNITGVV RSPFEQPQYY LAEPWQFSML AAYMFLLIVL GFPINFLTLY 
VTVQHKKLRT PLNYILLNLA VADLFMVFGG FTTTLYTSLH GYFVFGPTGC NLEGFFATLG 
GEIGLWSLVV LAIERYVVVC KPMSNFRFGE NHAIMGVAFT WVMALACAAP PLVGWSRYIP 
EGMQCSCGID YYTLKPEVNN ESFVIYMFVV HFTIPMIVIF FCYGQLVFTV KEAAAQQQES 
ATTQKAEKEV TRMVIIMVIF FLICWLPYAS VAMYIFTHQG SNFGPIFMTL PAFFAKTASI 
YNPIIYIMMN KQFRNCMLTT LCCGKNPLGD DEASATASKT ETSQVAPA

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.