Details for: RT1 M3 1

Gene ID: 24747

Symbol: RT1 M3 1

Ensembl ID: ENSRNOG00000000763

Description: RT1 class Ib, locus M3, gene 1

Associated with

  • Adaptive immune system
    (R-RNO-1280218)
  • Antigen presentation: folding, assembly and peptide loading of class i mhc
    (R-RNO-983170)
  • Antigen processing-cross presentation
    (R-RNO-1236975)
  • Class i mhc mediated antigen processing & presentation
    (R-RNO-983169)
  • Dap12 interactions
    (R-RNO-2172127)
  • Endosomal/vacuolar pathway
    (R-RNO-1236977)
  • Er-phagosome pathway
    (R-RNO-1236974)
  • Immune system
    (R-RNO-168256)
  • Immunoregulatory interactions between a lymphoid and a non-lymphoid cell
    (R-RNO-198933)
  • Innate immune system
    (R-RNO-168249)
  • Neutrophil degranulation
    (R-RNO-6798695)
  • Alpha-beta t cell activation involved in immune response
    (GO:0002287)
  • Antigen processing and presentation of endogenous peptide antigen via mhc class ib
    (GO:0002476)
  • Antigen processing and presentation of endogenous peptide antigen via mhc class i via er pathway, tap-independent
    (GO:0002486)
  • Antigen processing and presentation of exogenous peptide antigen via mhc class ib
    (GO:0002477)
  • Antigen processing and presentation of exogenous protein antigen via mhc class ib, tap-dependent
    (GO:0002481)
  • Cd8 receptor binding
    (GO:0042610)
  • Cis-golgi network membrane
    (GO:0033106)
  • Defense response to bacterium
    (GO:0042742)
  • Early endosome
    (GO:0005769)
  • External side of plasma membrane
    (GO:0009897)
  • Extracellular space
    (GO:0005615)
  • Identical protein binding
    (GO:0042802)
  • Immune response
    (GO:0006955)
  • Immune response-inhibiting cell surface receptor signaling pathway
    (GO:0002767)
  • Mhc class ib protein complex
    (GO:0032398)
  • Negative regulation of angiogenesis
    (GO:0016525)
  • Negative regulation of dendritic cell differentiation
    (GO:2001199)
  • Negative regulation of g0 to g1 transition
    (GO:0070317)
  • Negative regulation of natural killer cell mediated cytotoxicity
    (GO:0045953)
  • Negative regulation of phosphatidylinositol 3-kinase/protein kinase b signal transduction
    (GO:0051898)
  • Negative regulation of t cell mediated cytotoxicity
    (GO:0001915)
  • Negative regulation of t cell proliferation
    (GO:0042130)
  • Nitric oxide biosynthetic process
    (GO:0006809)
  • Peptide antigen binding
    (GO:0042605)
  • Peripheral b cell tolerance induction
    (GO:0002451)
  • Plasma membrane
    (GO:0005886)
  • Positive regulation of cellular senescence
    (GO:2000774)
  • Positive regulation of endothelial cell apoptotic process
    (GO:2000353)
  • Positive regulation of interleukin-12 production
    (GO:0032735)
  • Positive regulation of macrophage cytokine production
    (GO:0060907)
  • Positive regulation of natural killer cell cytokine production
    (GO:0002729)
  • Positive regulation of natural killer cell mediated cytotoxicity
    (GO:0045954)
  • Positive regulation of nitric oxide biosynthetic process
    (GO:0045429)
  • Positive regulation of regulatory t cell differentiation
    (GO:0045591)
  • Positive regulation of t cell mediated cytotoxicity
    (GO:0001916)
  • Positive regulation of t cell tolerance induction
    (GO:0002666)
  • Positive regulation of tolerance induction
    (GO:0002645)
  • Positive regulation of type ii interferon production
    (GO:0032729)
  • Protection from natural killer cell mediated cytotoxicity
    (GO:0042270)
  • Protein homodimerization activity
    (GO:0042803)
  • Protein homotrimerization
    (GO:0070207)
  • Response to molecule of bacterial origin
    (GO:0002237)
  • Signaling receptor binding
    (GO:0005102)

Other Information

Genular Protein ID: 3489050140

Symbol: A0A8I5ZTS2_RAT

Name: N/A

UniProtKB Accession Codes:

A0A8I5ZTS2

Database IDs:

AGR 1 ARBA 4 CDD 1 CTD 1 Ensembl 2 GO 43 Gene3D 2 GeneTree 1 InterPro 9 NCBI Taxonomy 1 OMA 1 PANTHER 2 PRINTS 1 PROSITE 3 Pfam 2 Proteomes 2 RGD 2 RefSeq 1 RuleBase 1 SAM 2 SMART 1 SUPFAM 2

Citations:

PubMed ID: 15057822

Title: Genome sequence of the Brown Norway rat yields insights into mammalian evolution.

PubMed ID: 15057822

DOI: 10.1038/nature02426

Sequence Information:

  • Length: 393
  • Mass: 44644
  • Checksum: 2B2C0D9729DF1164
  • Sequence:
    • MATSNKFSLL LMVVVALAVS RTGAGTHSLR YFHTALSRPG RGEPQYISVG YVDDKLFQRC 
DSVEEIPRME ARAPWMEKEG PEYWEELKLK VKSIAQRARA RLRTLIRYYN QSEGSSHILQ 
WMVACEVGPD MRLLGAHYQA AYDGSDYITL NEDLSSWTAA DMVAQITKSE LESEGRAEYF 
RAYVDGECLE LLHRFLQNGK EILQRADPPK AHVTLHPRPE GDVTLRCWAL GFYPADITLT 
WQLNGEDLTQ DMELVETKPS GDGTFQKWAS VVVPSGEEQK YTCHVEHEGL PEPLVLKWGG 
SSQSFVVIMV IIVIIVILAL LGGVLTVVLV YRRRGAGKQK GSLSYLPHLW TSGLRWNWPC 
LFCRKTFDPP PQMTQWFILL NHCILLCIYE CMI

Genular Protein ID: 3362685485

Symbol: A6KR51_RAT

Name: N/A

UniProtKB Accession Codes:

A6KR51

Database IDs:

ARBA 4 CDD 1 CTD 1 EMBL 2 GO 1 Gene3D 2 InterPro 9 KEGG 1 NCBI Taxonomy 1 PANTHER 2 PRINTS 1 PROSITE 3 Pfam 2 Proteomes 1 RGD 2 RefSeq 1 RuleBase 1 SAM 2 SMART 1 SMR 1 SUPFAM 2

Citations:

PubMed ID: 15632090

Title: Gene and alternative splicing annotation with AIR.

PubMed ID: 15632090

DOI: 10.1101/gr.2889405

Sequence Information:

  • Length: 339
  • Mass: 38135
  • Checksum: 76090EE4AB0D0A5A
  • Sequence:
    • MATSNKFSLL LMVVVALAVS RTGAGTHSLR YFHTALSRPG RGEPQYISVG YVDDKLFQRC 
DSVEEIPRME ARAPWMEKEG PEYWEELKLK VKSIAQRARA RLRTLIRYYN QSEGSSHILQ 
WMVACEVGPD MRLLGAHYQA AYDGSDYITL NEDLSSWTAA DMVAQITKSE LESEGRAEYF 
RAYVDGECLE LLHRFLQNGK EILQRADPPK AHVTLHPRPE GDVTLRCWAL GFYPADITLT 
WQLNGEDLTQ DMELVETKPS GDGTFQKWAS VVVPSGEEQK YTCHVEHEGL PEPLVLKWGG 
SSQSFVVIMV IIVIIVILAL LGGVLTVVLV YRRRGAGML

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.