Nelfe | ENSMUSG00000024369 | NCBI 27632

Details for: Nelfe

Gene ID: 27632

Symbol: Nelfe

Ensembl ID: ENSMUSG00000024369

Description: negative elongation factor complex member E, Rdbp

Associated with

Formation of rna pol ii elongation complex
(R-MMU-112382)
Formation of the early elongation complex
(R-MMU-113418)
Gene expression (transcription)
(R-MMU-74160)
Generic transcription pathway
(R-MMU-212436)
Rna polymerase ii pre-transcription events
(R-MMU-674695)
Rna polymerase ii transcription
(R-MMU-73857)
Rna polymerase ii transcription elongation
(R-MMU-75955)
Tp53 regulates transcription of dna repair genes
(R-MMU-6796648)
Transcriptional regulation by tp53
(R-MMU-3700989)
Chromatin
(GO:0000785)
Chromatin binding
(GO:0003682)
Mrna binding
(GO:0003729)
Negative regulation of transcription by rna polymerase ii
(GO:0000122)
Negative regulation of transcription elongation by rna polymerase ii
(GO:0034244)
Nelf complex
(GO:0032021)
Nuclear body
(GO:0016604)
Nucleoplasm
(GO:0005654)
Nucleus
(GO:0005634)
Plasma membrane
(GO:0005886)
Positive regulation of erk1 and erk2 cascade
(GO:0070374)
Positive regulation of protein modification process
(GO:0031401)
Positive regulation of transcription by rna polymerase ii
(GO:0045944)
Protein binding
(GO:0005515)
Rna binding
(GO:0003723)

Other Information

Proteins

Negative elongation factor E
Q3UIA1_MOUSE

Genular Protein ID: 1570761286

Symbol: NELFE_MOUSE

Name: Negative elongation factor E

UniProtKB Accession Codes:

P19426 P97485 P97486 Q9CZN3

Database IDs:

Citations:

PubMed ID: 3353717

Title: A previously undetected MHC gene with an unusual periodic structure.

PubMed ID: 3353717

DOI: 10.1126/science.3353717

PubMed ID: 16141072

Title: The transcriptional landscape of the mammalian genome.

PubMed ID: 16141072

DOI: 10.1126/science.1112014

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 14656967

Title: Analysis of the gene-dense major histocompatibility complex class III region and its comparison to mouse.

PubMed ID: 14656967

DOI: 10.1101/gr.1736803

PubMed ID: 9321489

Title: Murine D17H6S45 (Rd) gene: polymorphism and overlap with complement factor B.

PubMed ID: 9321489

DOI: 10.1007/s003359900579

PubMed ID: 15345747

Title: Phosphoproteomic analysis of the developing mouse brain.

PubMed ID: 15345747

DOI: 10.1074/mcp.m400085-mcp200

PubMed ID: 17242355

Title: Large-scale phosphorylation analysis of mouse liver.

PubMed ID: 17242355

DOI: 10.1073/pnas.0609836104

PubMed ID: 19144319

Title: The phagosomal proteome in interferon-gamma-activated macrophages.

PubMed ID: 19144319

DOI: 10.1016/j.immuni.2008.11.006

PubMed ID: 19131326

Title: Large scale localization of protein phosphorylation by use of electron capture dissociation mass spectrometry.

PubMed ID: 19131326

DOI: 10.1074/mcp.m800451-mcp200

PubMed ID: 21183079

Title: A tissue-specific atlas of mouse protein phosphorylation and expression.

PubMed ID: 21183079

DOI: 10.1016/j.cell.2010.12.001

PubMed ID: 26010750

Title: Translational initiation at a non-AUG start codon for human and mouse negative elongation factor-B.

PubMed ID: 26010750

DOI: 10.1371/journal.pone.0127422

PubMed ID: 31399344

Title: The histone deacetylase SIRT6 restrains transcription elongation via promoter-proximal pausing.

PubMed ID: 31399344

DOI: 10.1016/j.molcel.2019.06.034

Sequence Information:

Length: 375
Mass: 42554
Checksum: E7B5D51A366B7949
Sequence:

MLVIPPGLSE EEEALQKKFN KLKKKKKALL ALKKQSSSGP ASQGGVKRSL SEQPVVDTAT 
ATEQAKQLVK SGAISAIKAE TKNSGFKRSR TLEGKLKDPE KGPVPTFQPF QRSMSADEDL 
QEPSRRPQRK SLYESFVSSS DRLRELGQDG EEAEAPGAGD GPPRGFDWSY EEHGSARSSA 
SPPRSRSRDR SHDRSRDRDR DKERDRDRDR DRDRDRDKDK DRDRDRDRDK ERDRDRDRDR 
DRERDREGPF RRSDSFPERR APRKGNTLYV YGEDMTPTLL RGAFSPFGNI IDLSMDPPRN 
CAFVTYEKME SADQAVAELN GTQVESVQLK VNIARKQPML DAATGKSVWG SLAVQNSPKG 
CHRDKRTQIV YSDDL

Genular Protein ID: 771246498

Symbol: Q3UIA1_MOUSE

Name: N/A

UniProtKB Accession Codes:

Q3UIA1

Database IDs:

Citations:

PubMed ID: 10349636

Title: High-efficiency full-length cDNA cloning.

PubMed ID: 10349636

DOI: 10.1016/S0076-6879(99)03004-9

PubMed ID: 11042159

Title: Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.

PubMed ID: 11042159

DOI: 10.1101/gr.145100

PubMed ID: 11076861

Title: RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.

PubMed ID: 11076861

DOI: 10.1101/gr.152600

PubMed ID: 11217851

Title: Functional annotation of a full-length mouse cDNA collection.

PubMed ID: 11217851

DOI: 10.1038/35055500

PubMed ID: 12466851

Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.

PubMed ID: 12466851

DOI: 10.1038/nature01266

PubMed ID: 16141073

Title: Antisense Transcription in the Mammalian Transcriptome.

PubMed ID: 16141073

DOI: 10.1126/science.1112009

Sequence Information:

Length: 367
Mass: 41483
Checksum: 7EEE2FB0BA164C7E
Sequence:

MLVIPPGLSE EEEALQKKFN KLKKKKKALL ALKKQSSSGP ASQGGVKRSL SEQPVVDTAT 
ATEQAKQLVK SGAISAIKAE TKNSGFKRSR TLEGKLKDPE KGPVPTFQPF QRSMSADEDL 
QEPSRRPQRK SLYESFVSSS DRLRELGQDG EEAEAPGAGD GPPRGFDWSY EEHGSARSSA 
SPPRSRSRDR SHDRSRDRDR DKERDRDRDR DRDRDRDKDK DRDRDRDRDR DRDRERDREG 
PFRRSDSFPE RRAPRKGNTL YVYGEDMTPT LLRGAFSPFG NIIDLSMDPP RNCAFVTYEK 
MESADQAVAE LNGTQVESVQ LKVNIARKQP MLDAATGKSV WGSLAVQNSP KGCHRDKRTQ 
IVYSDDL

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: Nelfe

Associated with

Other Information

A previously undetected MHC gene with an unusual periodic structure. PubMed ID: 3353717

The transcriptional landscape of the mammalian genome. PubMed ID: 16141072

The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). PubMed ID: 15489334

Analysis of the gene-dense major histocompatibility complex class III region and its comparison to mouse. PubMed ID: 14656967

Murine D17H6S45 (Rd) gene: polymorphism and overlap with complement factor B. PubMed ID: 9321489

Phosphoproteomic analysis of the developing mouse brain. PubMed ID: 15345747

Large-scale phosphorylation analysis of mouse liver. PubMed ID: 17242355

The phagosomal proteome in interferon-gamma-activated macrophages. PubMed ID: 19144319

Large scale localization of protein phosphorylation by use of electron capture dissociation mass spectrometry. PubMed ID: 19131326

A tissue-specific atlas of mouse protein phosphorylation and expression. PubMed ID: 21183079

Translational initiation at a non-AUG start codon for human and mouse negative elongation factor-B. PubMed ID: 26010750

The histone deacetylase SIRT6 restrains transcription elongation via promoter-proximal pausing. PubMed ID: 31399344

High-efficiency full-length cDNA cloning. PubMed ID: 10349636

Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. PubMed ID: 11042159

RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. PubMed ID: 11076861

Functional annotation of a full-length mouse cDNA collection. PubMed ID: 11217851

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. PubMed ID: 12466851

Antisense Transcription in the Mammalian Transcriptome. PubMed ID: 16141073