Details for: Col1a1

Gene ID: 29393

Symbol: Col1a1

Ensembl ID: ENSRNOG00000003897

Description: collagen type I alpha 1 chain

Associated with

Other Information

Genular Protein ID: 1046090924

Symbol: CO1A1_RAT

Name: Collagen alpha-1(I) chain

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 10065941

Title: Expression of collagen alpha1(I) mRNA variants during tooth and bone formation in the rat.

PubMed ID: 10065941

DOI: 10.1177/00220345990780010101

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 5777344

Title: Comparative sequence studies of rat skin and tendon collagen. II. The absence of a short sequence at the amino terminus of the skin alpha-1 chain.

PubMed ID: 5777344

DOI: 10.1021/bi00829a010

PubMed ID: 5337886

Title: The amino acid sequence of peptides from the cross-linking region of rat skin collagen.

PubMed ID: 5337886

DOI: 10.1021/bi00855a019

PubMed ID: 4290711

Title: The incomplete hydroxylation of individual prolyl residues in collagen.

PubMed ID: 4290711

DOI: 10.1016/s0021-9258(18)96002-3

PubMed ID: 4327399

Title: Chemical studies on the cyanogen bromide peptides of rat skin collagen. Amino acid sequence of alpha 1-CB4.

PubMed ID: 4327399

DOI: 10.1021/bi00787a018

PubMed ID: 5411206

Title: Chemical studies on the cyanogen bromide peptides of rat skin collagen. The covalent structure of alpha 1-CB5, the major hexose-containing cyanogen bromide peptide of alpha 1.

PubMed ID: 5411206

DOI: 10.1021/bi00803a006

PubMed ID: 4335087

Title: Structure of rat skin collagen alpha 1-CB8. Amino acid sequence of the hydroxylamine-produced fragment HA1.

PubMed ID: 4335087

DOI: 10.1021/bi00800a019

PubMed ID: 4342027

Title: Structure of rat skin collagen alpha 1-CBB. Amino acid sequence of the hydroxyl amine-produced fragment HA2.

PubMed ID: 4342027

DOI: 10.1021/bi00770a020

PubMed ID: 4366532

Title: Chemical studies on the cyanogen bromide peptides of rat skin collagen. Amino acid sequence of alpha 1-CB3.

PubMed ID: 4366532

DOI: 10.1021/bi00711a025

PubMed ID: 6395893

Title: Construction of DNA sequences complementary to rat alpha 1 and alpha 2 collagen mRNA and their use in studying the regulation of type I collagen synthesis by 1,25-dihydroxyvitamin D.

PubMed ID: 6395893

DOI: 10.1021/bi00320a049

PubMed ID: 4126850

Title: Structural and immunogenic properties of a major antigenic determinant in neutral salt-extracted rat-skin collagen.

PubMed ID: 4126850

DOI: 10.1111/j.1432-1033.1973.tb02987.x

PubMed ID: 4636751

Title: Non-helical regions in rat collagen alpha 1-chain.

PubMed ID: 4636751

DOI: 10.1016/0014-5793(72)80542-8

PubMed ID: 15817460

Title: Endo180 binds to the C-terminal region of type I collagen.

PubMed ID: 15817460

DOI: 10.1074/jbc.m501155200

PubMed ID: 22673903

Title: Quantitative maps of protein phosphorylation sites across 14 different rat organs and tissues.

PubMed ID: 22673903

DOI: 10.1038/ncomms1871

PubMed ID: 16751282

Title: Microfibrillar structure of type I collagen in situ.

PubMed ID: 16751282

DOI: 10.1073/pnas.0502718103

Sequence Information:

  • Length: 1453
  • Mass: 137953
  • Checksum: BCDDC40C3167AE59
  • Sequence:
  • MFSFVDLRLL LLLGATALLT HGQEDIPEVS CIHNGLRVPN GETWKPDVCL ICICHNGTAV 
    CDGVLCKEDL DCPNPQKREG ECCPFCPEEY VSPDAEVIGV EGPKGDPGPQ GPRGPVGPPG 
    QDGIPGQPGL PGPPGPPGPP GPPGLGGNFA SQMSYGYDEK SAGVSVPGPM GPSGPRGLPG 
    PPGAPGPQGF QGPPGEPGEP GASGPMGPRG PPGPPGKNGD DGEAGKPGRP GERGPPGPQG 
    ARGLPGTAGL PGMKGHRGFS GLDGAKGDTG PAGPKGEPGS PGENGAPGQM GPRGLPGERG 
    RPGPPGSAGA RGNDGAVGAA GPPGPTGPTG PPGFPGAAGA KGEAGPQGAR GSEGPQGVRG 
    EPGPPGPAGA AGPAGNPGAD GQPGAKGANG APGIAGAPGF PGARGPSGPQ GPSGAPGPKG 
    NSGEPGAPGN KGDTGAKGEP GPAGVQGPPG PAGEEGKRGA RGEPGPSGLP GPPGERGGPG 
    SRGFPGADGV AGPKGPAGER GSPGPAGPKG SPGEAGRPGE AGLPGAKGLT GSPGSPGPDG 
    KTGPPGPAGQ DGRPGPAGPP GARGQAGVMG FPGPKGTAGE PGKAGERGVP GPPGAVGPAG 
    KDGEAGAQGA PGPAGPAGER GEQGPAGSPG FQGLPGPAGP PGEAGKPGEQ GVPGDLGAPG 
    PSGARGERGF PGERGVQGPP GPAGPRGNNG APGNDGAKGD TGAPGAPGSQ GAPGLQGMPG 
    ERGAAGLPGP KGDRGDAGPK GADGSPGKDG VRGLTGPIGP PGPAGAPGDK GETGPSGPAG 
    PTGARGAPGD RGEPGPPGPA GFAGPPGADG QPGAKGEPGD TGVKGDAGPP GPAGPAGPPG 
    PIGNVGAPGP KGSRGAAGPP GATGFPGAAG RVGPPGPSGN AGPPGPPGPV GKEGGKGPRG 
    ETGPAGRPGE VGPPGPPGPA GEKGSPGADG PAGSPGTPGP QGIAGQRGVV GLPGQRGERG 
    FPGLPGPSGE PGKQGPSGAS GERGPPGPMG PPGLAGPPGE SGREGSPGAE GSPGRDGAPG 
    AKGDRGETGP AGPPGAPGAP GAPGPVGPAG KNGDRGETGP AGPAGPIGPA GARGPAGPQG 
    PRGDKGETGE QGDRGIKGHR GFSGLQGPPG SPGSPGEQGP SGASGPAGPR GPPGSAGSPG 
    KDGLNGLPGP IGPPGPRGRT GDSGPAGPPG PPGPPGPPGP PSGGYDFSFL PQPPQEKSQD 
    GGRYYRADDA NVVRDRDLEV DTTLKSLSQQ IENIRSPEGS RKNPARTCRD LKMCHSDWKS 
    GEYWIDPNQG CNLDAIKVYC NMETGQTCVF PTQPSVPQKN WYISPNPKEK KHVWFGESMT 
    DGFQFEYGSE GSDPADVAIQ LTFLRLMSTE ASQNITYHCK NSVAYMDQQT GNLKKSLLLQ 
    GSNEIELRGE GNSRFTYSTL VDGCTSHTGT WGKTVIEYKT TKTSRLPIID VAPLDIGAPD 
    QEFGMDIGPA CFV

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.