Ptbp1 | ENSRNOG00000010448 | NCBI 29497

Details for: Ptbp1

Gene ID: 29497

Symbol: Ptbp1

Ensembl ID: ENSRNOG00000010448

Description: polypyrimidine tract binding protein 1

Associated with

Fgfr2 alternative splicing
(R-RNO-6803529)
Metabolism of rna
(R-RNO-8953854)
Mrna splicing
(R-RNO-72172)
Mrna splicing - major pathway
(R-RNO-72163)
Processing of capped intron-containing pre-mrna
(R-RNO-72203)
Signaling by fgfr
(R-RNO-190236)
Signaling by fgfr2
(R-RNO-5654738)
Signaling by receptor tyrosine kinases
(R-RNO-9006934)
Signal transduction
(R-RNO-162582)
3'-utr-mediated mrna stabilization
(GO:0070935)
Cardiac ventricle development
(GO:0003231)
Dna binding
(GO:0003677)
Dna metabolic process
(GO:0006259)
Gene expression
(GO:0010467)
Ires-dependent viral translational initiation
(GO:0075522)
Mrna binding
(GO:0003729)
Mrna processing
(GO:0006397)
Negative regulation of mrna splicing, via spliceosome
(GO:0048025)
Negative regulation of muscle cell differentiation
(GO:0051148)
Negative regulation of neuron differentiation
(GO:0045665)
Negative regulation of rna splicing
(GO:0033119)
Neurogenesis
(GO:0022008)
Neuron projection terminus
(GO:0044306)
Nuclear-transcribed mrna catabolic process
(GO:0000956)
Nucleus
(GO:0005634)
Positive regulation of calcineurin-nfat signaling cascade
(GO:0070886)
Positive regulation of insulin secretion
(GO:0032024)
Positive regulation of neuron projection development
(GO:0010976)
Positive regulation of protein dephosphorylation
(GO:0035307)
Positive regulation of secretory granule organization
(GO:1904411)
Positive regulation of transcription by rna polymerase ii
(GO:0045944)
Positive regulation of translation
(GO:0045727)
Pre-mrna binding
(GO:0036002)
Regulation of alternative mrna splicing, via spliceosome
(GO:0000381)
Regulation of cell differentiation
(GO:0045595)
Regulation of rna splicing
(GO:0043484)
Regulatory region rna binding
(GO:0001069)
Rna binding
(GO:0003723)
Rna splicing
(GO:0008380)
Sequence-specific dna binding
(GO:0043565)
Single-stranded dna binding
(GO:0003697)
Single-stranded dna endodeoxyribonuclease activity
(GO:0000014)

Other Information

Proteins

Polypyrimidine tract-binding protein 1
A6K8W5_RAT

Genular Protein ID: 2618327428

Symbol: PTBP1_RAT

Name: Polypyrimidine tract-binding protein 1

UniProtKB Accession Codes:

Q00438 F1LM18 Q63568 Q6P736

Database IDs:

Citations:

PubMed ID: 1681508

Title: Cloning and sequencing of PYBP, a pyrimidine-rich specific single strand DNA-binding protein.

PubMed ID: 1681508

DOI: 10.1093/nar/19.19.5237

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

Sequence Information:

Length: 556
Mass: 59366
Checksum: 08A7E5D5EF7F3811
Sequence:

MDGIVPDIAV GTKRGSDELF STCVSNGPFI MSSSASAANG NDSKKFKGDN RSTGVPSRVI 
HVRKLPSDVT EGEVISLGLP FGKVTNLLML KGKNQAFIEM STEEAANTMV NYYTSVAPVL 
RGQPIYIQFS NHKELKTDSS PNQARAQAAL QAVNSVQSGN LALAASAAAV DAGMAMAGQS 
PVLRIIVENL FYPVTLDVLH QIFSKFGTVL KIITFTKNNQ FQALLQYADP VSAQHAKLSL 
DGQNIYNACC TLRIDFSKLT SLNVKYNNDK SRDYTRPDLP SGDSQPSLDQ TMAAAFGAPG 
IMSASPYAGA GFPPTFAIPQ AAGLSVPNVH GALAPLAIPS AAAAAAAAGR IAIPGLAGAG 
NSVLLVSNLN PERVTPQSLF ILFGVYGDVQ RVKILFNKKE NALVQMADGS QAQLAMSHLN 
GHKLHGKSVR ITLSKHQSVQ LPREGQEDQG LTKDYGSSPL HRFKKPGSKN FQNIFPPSAT 
LHLSNIPPSV SEDDLKSLFS SNGGVVKGFK FFQKDRKMAL IQMGSVEEAV QALIELHNHD 
LGENHHLRVS FSKSTI

Genular Protein ID: 1422403652

Symbol: A6K8W5_RAT

Name: N/A

UniProtKB Accession Codes:

A6K8W5

Database IDs:

Citations:

PubMed ID: 15632090

Title: Gene and alternative splicing annotation with AIR.

PubMed ID: 15632090

DOI: 10.1101/gr.2889405

Sequence Information:

Length: 530
Mass: 56936
Checksum: A7A6CB0C87EAC1FC
Sequence:

MDGIVPDIAV GTKRGSDELF STCVSNGPFI MSSSASAANG NDSKKFKGDN RSTGVPSRVI 
HVRKLPSDVT EGEVISLGLP FGKVTNLLML KGKNQAFIEM STEEAANTMV NYYTSVAPVL 
RGQPIYIQFS NHKELKTDSS PNQARAQAAL QAVNSVQSGN LALAASAAAV DAGMAMAGQS 
PVLRIIVENL FYPVTLDVLH QIFSKFGTVL KIITFTKNNQ FQALLQYADP VSAQHAKLSL 
DGQNIYNACC TLRIDFSKLT SLNVKYNNDK SRDYTRPDLP SGDSQPSLDQ TMAAAFGLSV 
PNVHGALAPL AIPSAAAAAA AAGRIAIPGL AGAGNSVLLV SNLNPERVTP QSLFILFGVY 
GDVQRVKILF NKKENALVQM ADGSQAQLAM SHLNGHKLHG KSVRITLSKH QSVQLPREGQ 
EDQGLTKDYG SSPLHRFKKP GSKNFQNIFP PSATLHLSNI PPSVSEDDLK SLFSSNGGVV 
KGFKFFQKDR KMALIQMGSV EEAVQALIEL HNHDLGENHH LRVSFSKSTI

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.