Details for: Nfya

Gene ID: 29508

Symbol: Nfya

Ensembl ID: ENSRNOG00000012702

Description: nuclear transcription factor Y subunit alpha

Associated with

  • Ccaat-binding factor complex
    (GO:0016602)
  • Dna-binding transcription activator activity, rna polymerase ii-specific
    (GO:0001228)
  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Nucleoplasm
    (GO:0005654)
  • Nucleus
    (GO:0005634)
  • Positive regulation of dna-templated transcription
    (GO:0045893)
  • Positive regulation of stem cell proliferation
    (GO:2000648)
  • Positive regulation of transcription by rna polymerase ii
    (GO:0045944)
  • Protein-dna complex
    (GO:0032993)
  • Protein binding
    (GO:0005515)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of stem cell population maintenance
    (GO:2000036)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rhythmic process
    (GO:0048511)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)
  • Rna polymerase ii transcription regulator complex
    (GO:0090575)
  • Sequence-specific dna binding
    (GO:0043565)
  • Stem cell proliferation
    (GO:0072089)
  • Transcription by rna polymerase ii
    (GO:0006366)
  • Transcription cis-regulatory region binding
    (GO:0000976)
  • Transcription coregulator binding
    (GO:0001221)

Other Information

Genular Protein ID: 1855375567

Symbol: NFYA_RAT

Name: Nuclear transcription factor Y subunit alpha

UniProtKB Accession Codes:

P18576

Database IDs:

AGR 1 AlphaFoldDB 1 Bgee 1 BioGRID 1 CTD 1 EMBL 1 ExpressionAtlas 1 GO 19 Gene3D 1 Genevisible 1 HOGENOM 1 InParanoid 1 IntAct 1 InterPro 2 KEGG 1 MINT 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PIR 1 PRINTS 1 PRO 1 PROSITE 2 PROSITE-ProRule 1 PaxDb 1 Pfam 1 PhosphoSitePlus 1 PhylomeDB 1 Proteomes 1 RGD 1 RefSeq 1 SAM 1 SMART 1 SMR 1 STRING 1 UCSC 1 VEuPathDB 1 eggNOG 1 iPTMnet 1

Citations:

PubMed ID: 2196566

Title: The B subunit of a rat heteromeric CCAAT-binding transcription factor shows a striking sequence identity with the yeast Hap2 transcription factor.

PubMed ID: 2196566

DOI: 10.1073/pnas.87.14.5378

PubMed ID: 1569083

Title: Biochemical analysis of the B subunit of the heteromeric CCAAT-binding factor. A DNA-binding domain and a subunit interaction domain are specified by two separate segments.

PubMed ID: 1569083

DOI: 10.1016/s0021-9258(18)42440-4

PubMed ID: 22673903

Title: Quantitative maps of protein phosphorylation sites across 14 different rat organs and tissues.

PubMed ID: 22673903

DOI: 10.1038/ncomms1871

Sequence Information:

  • Length: 341
  • Mass: 36294
  • Checksum: 3332DB595D67B3A8
  • Sequence:
    • MEQYTANSNS STEQIVVQAG QIQQQQQGGV TAVQLQTEAQ VASASGQQVQ TLQVVQGQPL 
MVQVSGGQLI TSTGQPIMVQ AVPGGQGQTI MQVPVSGTQG LQQIQLVPPG QIQIQGGQAV 
QVQGQQGQTQ QIIIQQPQTA VTAGQTQTQQ QIAVQGQQVA QTAEGQTIVY QPVNADGTIL 
QQGMITIPAA SLAGAQIVQT GANTNTTSSG QGTVTVTLPV AGNVVNSGGM VMMVPGAGSV 
PAIQRIPLPG AEMLEEEPLY VNAKQYHRIL KRRQARAKLE AEGKIPKERR KYLHESRHRH 
AMARKRGEGG RFFSPKEKDS PHMQDPNQAD EEAMTQIIRV S

Genular Protein ID: 4025361559

Symbol: A0A8I5Y9Y4_RAT

Name: N/A

UniProtKB Accession Codes:

A0A8I5Y9Y4

Database IDs:

ARBA 5 CTD 1 Ensembl 2 GO 7 Gene3D 1 GeneTree 1 InterPro 2 NCBI Taxonomy 1 OMA 1 PANTHER 2 PRINTS 1 PROSITE 2 PeptideAtlas 1 Pfam 1 Proteomes 2 RGD 2 RefSeq 1 RuleBase 1 SAM 1 SMART 1 SMR 1

Citations:

PubMed ID: 15057822

Title: Genome sequence of the Brown Norway rat yields insights into mammalian evolution.

PubMed ID: 15057822

DOI: 10.1038/nature02426

Sequence Information:

  • Length: 346
  • Mass: 36749
  • Checksum: AE6B87FBA26F5C68
  • Sequence:
    • MEQYTANSNS STEQIVVQAG QIQQQQGGVT AVQLQTEAQV ASASGQQVQT LQVVQGQPLM 
VQVSGGQLIT STGQPIMVQA VPGGQGQTIM QVPVSGTQGL QQIQLVPPGQ IQIQGGQAVQ 
VQGQQGQTQQ IIIQQPQTAV TAGQTQTQQQ IAVQGQQVAQ TAEGQTIVYQ PVNADGTILQ 
QVTVPVSGMI TIPAASLAGA QIVQTGANTN TTSSGQGTVT VTLPVAGNVV NSGGMVMMVP 
GAGSVPAIQR IPLPGAEMLE EEPLYVNAKQ YHRILKRRQA RAKLEAEGKI PKERRKYLHE 
SRHRHAMARK RGEGGRFFSP KEKDSPHMQD PNQADEEAMT QIIRVS

Genular Protein ID: 802037814

Symbol: A6JIF2_RAT

Name: N/A

UniProtKB Accession Codes:

A6JIF2

Database IDs:

ARBA 5 CTD 1 EMBL 2 GO 3 Gene3D 1 InterPro 2 NCBI Taxonomy 1 PANTHER 2 PRINTS 1 PROSITE 2 Pfam 1 Proteomes 2 RGD 2 RefSeq 1 RuleBase 1 SAM 1 SMART 1

Sequence Information:

  • Length: 312
  • Mass: 33357
  • Checksum: 9420A653010A5000
  • Sequence:
    • MEQYTANSNS STEQIVVQAG QIQQQVQGQP LMVQVSGGQL ITSTGQPIMV QAVPGGQGQT 
IMQVPVSGTQ GLQQIQLVPP GQIQIQGGQA VQVQGQQGQT QQIIIQQPQT AVTAGQTQTQ 
QQIAVQGQQV AQTAEGQTIV YQPVNADGTI LQQGMITIPA ASLAGAQIVQ TGANTNTTSS 
GQGTVTVTLP VAGNVVNSGG MVMMVPGAGS VPAIQRIPLP GAEMLEEEPL YVNAKQYHRI 
LKRRQARAKL EAEGKIPKER RKYLHESRHR HAMARKRGEG GRFFSPKEKD SPHMQDPNQA 
DEEAMTQIIR VS

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.