Details for: clocka

Gene ID: 30140

Symbol: clocka

Ensembl ID: ENSDARG00000011703

Description: clock circadian regulator a

Associated with

Other Information

Genular Protein ID: 3792652899

Symbol: Q5RIV1_DANRE

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 10760301

Title: Asynchronous oscillations of two zebrafish CLOCK partners reveal differential clock control and function.

PubMed ID: 10760301

DOI: 10.1073/pnas.97.8.4339

PubMed ID: 11517315

Title: A cell-based system that recapitulates the dynamic light-dependent regulation of the vertebrate clock.

PubMed ID: 11517315

PubMed ID: 14653994

Title: Light regulates the cell cycle in zebrafish.

PubMed ID: 14653994

PubMed ID: 12832412

Title: Functional and structural analyses of cryptochrome. Vertebrate CRY regions responsible for interaction with the CLOCK:BMAL1 heterodimer and its nuclear localization.

PubMed ID: 12832412

PubMed ID: 15591021

Title: The orphan receptor Rev-erbalpha gene is a target of the circadian clock pacemaker.

PubMed ID: 15591021

DOI: 10.1677/jme.1.01554

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 30373515

Title: Long non-coding RNAs have age-dependent diurnal expression that coincides with age-related changes in genome-wide facultative heterochromatin.

PubMed ID: 30373515

PubMed ID: 30004691

Title: Dydrogesterone Causes Male Bias and Accelerates Sperm Maturation in Zebrafish (Danio rerio).

PubMed ID: 30004691

PubMed ID: 29940038

Title: Interactions between the circadian clock and TGF-beta signaling pathway in zebrafish.

PubMed ID: 29940038

PubMed ID: 30045561

Title: Artificial Light at Night (ALAN), an alarm to ovarian physiology: A study of possible chronodisruption on zebrafish (Danio rerio).

PubMed ID: 30045561

PubMed ID: 30615915

Title: Identification and expression of mangrove rivulus (Kryptolebias marmoratus) histone deacetylase (HDAC) and lysine acetyltransferase (KAT) genes.

PubMed ID: 30615915

Sequence Information:

  • Length: 892
  • Mass: 100830
  • Checksum: 14844D488ABD3C3F
  • Sequence:
  • MTSSIDRDDS SIFDGLMEED EKDKAKRVSR NRSEKKRRDQ FNVLIKELGT MLPGNTRKMD 
    KSTILQKSID FLRKHKEIAA QSESSEIRQD WKPPFLSNEE FTQLMLEALD GFFLAIMTDG 
    NIIYVSESVT SLLEHLPSDL VDQNLLNFLP LGEHSEVYKA LSTHMLEGET LTPDYLKTKN 
    QLEFCCHMLR GTIDPKEPPV YEYVKFIGNF KSLNTVPNST RNGFEGVIQR SLRHAFEDRV 
    CFIATVRLAK PQFIKEMCTV EEPNEEFTSR HSLEWKFLFL DHRAPPIIGY LPFEVLGTSG 
    YDYYHVDDLE TLAKCHEHLM QYGKGKSCYY RFLTKGQQWI WLQTHYYITY HQWNSRPEFI 
    VCTHTVVSYA EVRAEQRREL GIEESPPEIS ADKSQDSGSE SQLNTSSLKE ALERFDHSRT 
    PSASSRSSRK SSSHTAVSDP TSTQTKLQTD RSTPPRQSVS AIEMTSQRRS SISSQSMSSQ 
    TTGQTMGTSL VSQPQQPQTL QATVQPVLQF STQMDAMQHL KEQLEQRTRM IEANIQRQQE 
    ELRQIQDELQ RVQGQGLQMF LQPSGGGLNL SSVQLTQSSS VQTAGTLSMQ GAVVPTATLQ 
    SSLQSTHSST QHTVTQHPQQ TAVQQQNLLR DQTTNLNQQS QRSTHTLQSP QGALPASLYN 
    TMMISQPTQA NVVQISTSLA QNSSTSGAAV ATFSQDRQIR FPATQQLLTK LVTGPMACGA 
    VMVPTTMFMG QVVTAFAPQQ GQPQTISIAQ QPSAQTADQQ THTQAQTQAA ATAQQQGQNQ 
    AQLTQQQTQF LQAPRLLHSN QSTQLILQAA FPLQQQGTFT TATQQQQQLH QQQQQLQQQQ 
    QLQQQQQQQQ QQLQQQHQQQ QQQLQQQHQQ QQQQLAAHRS DSMTERSNPP PQ

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.