Details for: hoxb5a

Gene ID: 30317

Symbol: hoxb5a

Ensembl ID: ENSDARG00000013057

Description: homeobox B5a

Associated with

  • Anterior/posterior pattern specification
    (GO:0009952)
  • Brain development
    (GO:0007420)
  • Cell fate specification
    (GO:0001708)
  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Nucleus
    (GO:0005634)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)

Other Information

Genular Protein ID: 1651916919

Symbol: HXB5A_DANRE

Name: Homeobox protein Hox-B5a

UniProtKB Accession Codes:

P09014 Q4PRA3 Q6LBU7 Q8AWY7

Database IDs:

AlphaFoldDB 1 Bgee 1 CDD 1 CTD 1 EMBL 7 GO 7 Gene3D 1 HOGENOM 1 InParanoid 1 InterPro 6 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PIR 1 PRINTS 2 PRO 1 PROSITE 3 PROSITE-ProRule 1 PaxDb 1 Pfam 1 PhylomeDB 1 Proteomes 1 RefSeq 1 SAM 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 TreeFam 1 ZFIN 1 eggNOG 1

Citations:

PubMed ID: 2902580

Title: Primary structure, developmentally regulated expression and potential duplication of the zebrafish homeobox gene ZF-21.

PubMed ID: 2902580

DOI: 10.1093/nar/16.19.9097

PubMed ID: 8097929

Title: Sequence analysis of the zebrafish hox-B5/B6 region.

PubMed ID: 8097929

DOI: 10.1016/0167-4781(93)90253-a

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 16174031

Title: Genomic annotation and transcriptome analysis of the zebrafish (Danio rerio) hox complex with description of a novel member, hoxb13a.

PubMed ID: 16174031

DOI: 10.1111/j.1525-142x.2005.05042.x

PubMed ID: 2895022

Title: A zebrafish homologue of the murine Hox-2.1 gene.

PubMed ID: 2895022

DOI: 10.1016/0014-5793(88)80634-3

PubMed ID: 9425136

Title: Zebrafish hox genes: genomic organization and modified colinear expression patterns in the trunk.

PubMed ID: 9425136

DOI: 10.1242/dev.125.3.407

Sequence Information:

  • Length: 275
  • Mass: 30558
  • Checksum: E8C4586BCEFA3AD4
  • Sequence:
    • MSSYFVNSFS GRYPNGPDYQ LLNYGTSSSA MNASYRDSGT MHSGSYGYNY NGMDLSVNRS 
TSTGHFGAVG DNSRVFQSPA PETRFRQPSS CSLASPEPLP CSNSESLGPK GSSPPSDQST 
TTAGNNLNSN THFTEIDEAS ASSETEEASH RANNSAPRTQ QKQETTATST TSATSDGQAP 
QIFPWMRKLH ISHDMTGPDG KRARTAYTRY QTLELEKEFH FNRYLTRRRR IEIAHALCLS 
ERQIKIWFQN RRMKWKKDNK LKSMSLATAG SAFQP

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.