Details for: pou6f1

Gene ID: 30334

Symbol: pou6f1

Ensembl ID: ENSDARG00000011570

Description: POU class 6 homeobox 1

Associated with

  • Atrioventricular canal morphogenesis
    (GO:1905222)
  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Nucleus
    (GO:0005634)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)

Other Information

Genular Protein ID: 2199708714

Symbol: PO6F1_DANRE

Name: POU domain, class 6, transcription factor 1

UniProtKB Accession Codes:

P31367 B3DFR1

Database IDs:

AlphaFoldDB 1 Bgee 1 CDD 1 CTD 1 EMBL 3 ExpressionAtlas 1 GO 5 Gene3D 2 HOGENOM 1 InParanoid 1 InterPro 5 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PIR 1 PRINTS 1 PRO 1 PROSITE 4 PROSITE-ProRule 2 PaxDb 1 Pfam 2 PhylomeDB 1 Proteomes 1 RefSeq 1 SAM 1 SMART 2 SMR 1 STRING 1 SUPFAM 2 TreeFam 1 ZFIN 1 eggNOG 1

Citations:

PubMed ID: 8441661

Title: Zebrafish pou[c]: a divergent POU family gene ubiquitously expressed during embryogenesis.

PubMed ID: 8441661

DOI: 10.1093/nar/21.3.475

Sequence Information:

  • Length: 610
  • Mass: 63124
  • Checksum: 51D7140A6F16DD66
  • Sequence:
    • MDTEDLPANN APLTVNEQLL GSCTLKFPAQ DAQVIVMSGQ ETIRVLEVEV DTALSSAGAA 
ESGGDEEGSG QSLEATEEAQ LDGPVTTSST TAVTVEVSAP VVQTVVSKAA ISVSPAQQTS 
VPITVQACPQ VLTQDGLASL MTGMLAQQSS LGQPLLIPLS MAGSVGGQGG LAVLTLPTAT 
VATLPGLAAA SPAGGLLKLP FAGLQAATVL NSVQTQLQAP AQAVLQPQMS ALQAMQQTQT 
TAATTASIVQ KASEPSVSVA TLQTAGLSIN PAIISAASLG AQPQFISSLT TTPIITSAMS 
NVAGLTSQLI TNAQGQVIGT LPLLVNPASL AGAAAASALP AQGLQVQTVA PQLLLNSQGQ 
IIATIGNGPT AAIPSTASVL PKATVPLTLT KTTTQGPVGK VAPSKVIIAP QPSVVKPVTS 
LTAAGVIACG EMPTVGQLVN KPSAVKDEEA INLEEIREFA KNFKIRRLSL GLTQTQVGQA 
LTATEGPAYS QSAICRFEKL DITPKSAQKL KPVLERWLAE AELWNQKGQQ NLMEFVGGEP 
SKKRKRRTSF TPQAIEVLNT YFEKNSLPTG QEITEIAKEL NYDREVVRVW FCNRRQTLKN 
TSKINVFQSQ

Genular Protein ID: 4073559897

Symbol: A0A8M6Z4C6_DANRE

Name: N/A

UniProtKB Accession Codes:

A0A8M6Z4C6

Database IDs:

ARBA 3 CDD 1 CTD 1 GO 3 Gene3D 2 InterPro 5 NCBI Taxonomy 1 PANTHER 2 PRINTS 1 PROSITE 6 PROSITE-ProRule 1 Pfam 2 Proteomes 2 RefSeq 2 RuleBase 2 SAM 1 SMART 2 SUPFAM 2 ZFIN 2

Citations:

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

Sequence Information:

  • Length: 574
  • Mass: 59285
  • Checksum: 412F6E0E79AB3C0F
  • Sequence:
    • MSGQETIRVL EVEVDTALSS AGAAESGGDE EGSGQSLEAT EEAQLDGPVT TSSTTAVTVE 
VSAPVVQTVV SKAAISVSPA QQTSVPITVQ ACPQVLTQDG LASLMTGMLA QQSSLGQPLL 
IPLSMAGSVG GQGGLAVLTL PTATVATLPG LAAASPAGGL LKLPFAGLQA ATVLNSVQTQ 
LQAPAQAVLQ PQMSALQAMQ QTQTTAATTA SIVQKASEPS VSVATLQTAG LSINPAIISA 
ASLGAQPQFI SSLTTTPIIT SAMSNVAGLT SQLITNAQGQ VIGTLPLLVN PASLAGAAAA 
SALPAQGLQV QTVAPQLLLN SQGQIIATIG NGPTAAIPST ASVLPKATVP LTLTKTTTQG 
PVGKVAPSKV IIAPQPSVVK PVTSLTAAGV IACGEMPTVG QLVNKPSAVK DEEAINLEEI 
REFAKNFKIR RLSLGLTQTQ VGQALTATEG PAYSQSAICR FEKLDITPKS AQKLKPVLER 
WLAEAELWNQ KGQQNLMEFV GGEPSKKRKR RTSFTPQAIE VLNTYFEKNS LPTGQEITEI 
AKELNYDREV VRVWFCNRRQ TLKNTSKINV FQSQ

Genular Protein ID: 1310213787

Symbol: A0A2R8QIA3_DANRE

Name: N/A

UniProtKB Accession Codes:

A0A2R8QIA3 A0A8M2B962

Database IDs:

ARBA 3 Bgee 1 CDD 1 CTD 1 EMBL 1 Ensembl 3 GO 3 Gene3D 2 InterPro 5 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PRINTS 1 PROSITE 6 PROSITE-ProRule 1 Pfam 2 Proteomes 2 RefSeq 2 RuleBase 2 SAM 1 SMART 2 SUPFAM 2 ZFIN 2

Citations:

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

Sequence Information:

  • Length: 595
  • Mass: 61550
  • Checksum: ED2E09B48C0D7FDF
  • Sequence:
    • MDTEDLPANN APLTVNEQVI VMSGQETIRV LEVEVDTALS SAGAAESGGD EEGSGQSLEA 
TEEAQLDGPV TTSSTTAVTV EVSAPVVQTV VSKAAISVSP AQQTSVPITV QACPQVLTQD 
GLASLMTGML AQQSSLGQPL LIPLSMAGSV GGQGGLAVLT LPTATVATLP GLAAASPAGG 
LLKLPFAGLQ AATVLNSVQT QLQAPAQAVL QPQMSALQAM QQTQTTAATT ASIVQKASEP 
SVSVATLQTA GLSINPAIIS AASLGAQPQF ISSLTTTPII TSAMSNVAGL TSQLITNAQG 
QVIGTLPLLV NPASLAGAAA ASALPAQGLQ VQTVAPQLLL NSQGQIIATI GNGPTAAIPS 
TASVLPKATV PLTLTKTTTQ GPVGKVAPSK VIIAPQPSVV KPVTSLTAAG VIACGEMPTV 
GQLVNKPSAV KDEEAINLEE IREFAKNFKI RRLSLGLTQT QVGQALTATE GPAYSQSAIC 
RFEKLDITPK SAQKLKPVLE RWLAEAELWN QKGQQNLMEF VGGEPSKKRK RRTSFTPQAI 
EVLNTYFEKN SLPTGQEITE IAKELNYDRE VVRVWFCNRR QTLKNTSKIN VFQSQ

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.