Details for: hoxb3a

Gene ID: 30339

Symbol: hoxb3a

Ensembl ID: ENSDARG00000029263

Description: homeobox B3a

Associated with

  • Anterior/posterior pattern specification
    (GO:0009952)
  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Embryonic skeletal system morphogenesis
    (GO:0048704)
  • Nucleus
    (GO:0005634)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)

Other Information

Genular Protein ID: 2419457047

Symbol: HXB3A_DANRE

Name: Homeobox protein Hox-B3a

UniProtKB Accession Codes:

O42368 Q4VBK5 Q8AWY5

Database IDs:

AlphaFoldDB 1 Bgee 1 CDD 1 CTD 1 EMBL 6 ExpressionAtlas 1 GO 6 Gene3D 1 HOGENOM 1 InParanoid 1 InterPro 6 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PRINTS 1 PRO 1 PROSITE 3 PROSITE-ProRule 1 PaxDb 1 Pfam 2 PhylomeDB 1 Proteomes 1 RefSeq 7 SAM 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 TreeFam 1 ZFIN 1 eggNOG 1

Citations:

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 9425135

Title: Zebrafish hox genes: expression in the hindbrain region of wild-type and mutants of the segmentation gene, valentino.

PubMed ID: 9425135

DOI: 10.1242/dev.125.3.393

PubMed ID: 15054858

Title: Comparative genomic analysis of vertebrate Hox3 and Hox4 genes.

PubMed ID: 15054858

DOI: 10.1002/jez.b.20012

Sequence Information:

  • Length: 417
  • Mass: 44580
  • Checksum: 33A68839BE3CC35A
  • Sequence:
    • MQKTTYYDNS TLFGGYSYQG ANGFGYDAPA PAFQNSAHLE GDYQRSACSL QSLGTSAPPQ 
PQHAKTKELN GSCMRPSLPP EHHPPPQVSP PQNTVNVAAT NATQQPGGSG GGGGAGSGGT 
SKSSSKSSSM ATNPTLTKQI FPWMKESRQN TKQKNSSPSA SSANAESSGG EKSPPGSAAS 
KRARTAYTSA QLVELEKEFH FNRYLCRPRR VEMANLLNLS ERQIKIWFQN RRMKYKKDQK 
SKGIGSSSGG PSPTGSPPLP MQSSAGFMNS MHSMGSYDAP SPPSFNKPHQ NAYAMSTAYQ 
NPMKGCPPQQ KYGNTPPDYD PHGLQGNSGN YGTPNMQGSP VYVGGNYVDA MPATGPSMYG 
LNHLPHHQSA SMDYNGATQM SANQHHGPCD PHPTYTDLSA HHPSQGRIQE APKLTHL

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.