Details for: hoxb6a

Gene ID: 30341

Symbol: hoxb6a

Ensembl ID: ENSDARG00000010630

Description: homeobox B6a

Associated with

  • Anterior/posterior pattern specification
    (GO:0009952)
  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Nucleus
    (GO:0005634)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)

Other Information

Genular Protein ID: 2075998617

Symbol: HXB6A_DANRE

Name: Homeobox protein Hox-B6a

UniProtKB Accession Codes:

P15861 Q4PRA2 Q8AWY8

Database IDs:

AlphaFoldDB 1 BMRB 1 CDD 1 CTD 1 EMBL 4 GO 5 Gene3D 1 InParanoid 1 InterPro 6 KEGG 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PIR 1 PRINTS 2 PRO 1 PROSITE 3 PROSITE-ProRule 1 PaxDb 1 Pfam 1 PhylomeDB 1 Proteomes 1 RefSeq 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 ZFIN 1 eggNOG 1

Citations:

PubMed ID: 1968004

Title: The zebrafish homeobox gene hox-2.2: transcription unit, potential regulatory regions and in situ localization of transcripts.

PubMed ID: 1968004

DOI: 10.1002/j.1460-2075.1990.tb08138.x

PubMed ID: 8097929

Title: Sequence analysis of the zebrafish hox-B5/B6 region.

PubMed ID: 8097929

DOI: 10.1016/0167-4781(93)90253-a

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 16174031

Title: Genomic annotation and transcriptome analysis of the zebrafish (Danio rerio) hox complex with description of a novel member, hoxb13a.

PubMed ID: 16174031

DOI: 10.1111/j.1525-142x.2005.05042.x

PubMed ID: 9425136

Title: Zebrafish hox genes: genomic organization and modified colinear expression patterns in the trunk.

PubMed ID: 9425136

DOI: 10.1242/dev.125.3.407

Sequence Information:

  • Length: 228
  • Mass: 26088
  • Checksum: 4AC1B6C545B8668D
  • Sequence:
    • MSSYFLNSTF PVTLPGGQES FLGQIPLYSS GYTDPLRHYP GAAYGGSSVQ EKAYPSSFYQ 
QANGAYSRAT AAGPCDYATA SFYREKDPAC ALASIEEHSF VLSQDHRKTD CTGSTGKSIY 
PEADEQKPSA PVYPWMQRMN SCNGTFGNAG RRGRQTYTRY QTLELEKEFH FNRYLTRRRR 
IEIAHALCLT ERQIKIWFQN RRMKWKKENK LINCSQTSGE EEEEKRTE

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.