Details for: hoxc6a

Gene ID: 30346

Symbol: hoxc6a

Ensembl ID: ENSDARG00000070343

Description: homeobox C6a

Associated with

  • Anterior/posterior pattern specification
    (GO:0009952)
  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Nucleus
    (GO:0005634)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)

Other Information

Genular Protein ID: 2591692569

Symbol: HXC6A_DANRE

Name: Homeobox protein Hox-C6a

UniProtKB Accession Codes:

P15862 Q4PR89 Q5XJJ4 Q6LAJ7 Q9PWM4

Database IDs:

AlphaFoldDB 1 CDD 1 CTD 1 DNASU 1 EMBL 5 GO 5 Gene3D 1 InParanoid 1 InterPro 5 KEGG 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PIR 1 PRINTS 1 PRO 1 PROSITE 3 PROSITE-ProRule 1 PaxDb 1 Pfam 1 PhylomeDB 1 Proteomes 1 RefSeq 1 SAM 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 TreeFam 1 ZFIN 1 eggNOG 1

Citations:

PubMed ID: 9831563

Title: Zebrafish hox clusters and vertebrate genome evolution.

PubMed ID: 9831563

DOI: 10.1126/science.282.5394.1711

PubMed ID: 16174031

Title: Genomic annotation and transcriptome analysis of the zebrafish (Danio rerio) hox complex with description of a novel member, hoxb13a.

PubMed ID: 16174031

DOI: 10.1111/j.1525-142x.2005.05042.x

PubMed ID: 1968004

Title: The zebrafish homeobox gene hox-2.2: transcription unit, potential regulatory regions and in situ localization of transcripts.

PubMed ID: 1968004

DOI: 10.1002/j.1460-2075.1990.tb08138.x

PubMed ID: 9425136

Title: Zebrafish hox genes: genomic organization and modified colinear expression patterns in the trunk.

PubMed ID: 9425136

DOI: 10.1242/dev.125.3.407

PubMed ID: 15385162

Title: Differences in expression pattern and function between zebrafish hoxc13 orthologs: recruitment of Hoxc13b into an early embryonic role.

PubMed ID: 15385162

DOI: 10.1016/j.ydbio.2004.07.018

Sequence Information:

  • Length: 231
  • Mass: 26733
  • Checksum: 65164A13541D7E8A
  • Sequence:
    • MNSYFANPSL SCHLSGGQEV LPNMPLNSTT YDSVRHFSSY GTTVTQNRIY ASPFYSPQDN 
VVFGSSRGPY EYGSNVFLQD KDVLPSCRQT SMGLNAQSHV AQEYNLEQAR AGTQDQKANN 
IQIYPWMQRM NSHSGVGYGS DRRRGRQIYS RYQTLELEKE FHFNRYLTRR RRIEIANALC 
LTERQIKIWF QNRRMKWKKE TNLTSTVPGT ESAGTPQETE KETEEEPKKK D

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.