Details for: hoxd3a

Gene ID: 30349

Symbol: hoxd3a

Ensembl ID: ENSDARG00000059280

Description: homeobox D3a

Associated with

  • Anterior/posterior pattern specification
    (GO:0009952)
  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Embryonic skeletal system morphogenesis
    (GO:0048704)
  • Nucleus
    (GO:0005634)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)

Other Information

Genular Protein ID: 3485534968

Symbol: HXD3A_DANRE

Name: Homeobox protein Hox-D3a

UniProtKB Accession Codes:

O42370 B0S5Y4

Database IDs:

AlphaFoldDB 1 Bgee 1 CDD 1 CTD 1 EMBL 2 GO 6 Gene3D 1 HOGENOM 1 InParanoid 1 InterPro 6 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PRINTS 1 PRO 1 PROSITE 3 PROSITE-ProRule 1 PaxDb 1 Pfam 2 PhylomeDB 1 Proteomes 1 RefSeq 1 SAM 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 ZFIN 1 eggNOG 1

Citations:

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 9425135

Title: Zebrafish hox genes: expression in the hindbrain region of wild-type and mutants of the segmentation gene, valentino.

PubMed ID: 9425135

DOI: 10.1242/dev.125.3.393

Sequence Information:

  • Length: 396
  • Mass: 43102
  • Checksum: A608A1E60C315786
  • Sequence:
    • MQKATYYDNA GLFGGYSYPK SDSYTYGPTH QGFSSSSIEN DYQSPICPIQ TTSVRQATHK 
NGDINGSCMR PSASQGNSQP ESISEQQQAA PLAASSPSPS TNSTQKKKSP SSNGSSTATP 
VISKQIFPWM KETRQNAKQK STNCPAAGET CDDKSPPGPA SKRVRTAYTS AQLVELEKEF 
HFNRYLCRPR RVEMANLLNL TERQIKIWFQ NRRMKYKKDQ KSKGIMHSPL GHSPDRSPPL 
SGSNHIGYSG QLPNVNSLSY DAPSPPSFAK PQQNIYGLAA YTAPLGGCIP QQKRYPGTEY 
DHHSMQGNGS FANANLQSSP VYVGGNFVDS MPASGPMFNL GHLPHPSSAS VDYSCAAQIP 
GNHHHGPCDP HPTYTDLSSH HASQGRLQDA PKLTHL

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.