psmb6 | ENSDARG00000002240 | NCBI 30388

Details for: psmb6

Gene ID: 30388

Symbol: psmb6

Ensembl ID: ENSDARG00000002240

Description: proteasome 20S subunit beta 6

Associated with

Abc-family proteins mediated transport
(R-DRE-382556)
Activation of nf-kappab in b cells
(R-DRE-1169091)
Adaptive immune system
(R-DRE-1280218)
Antigen processing-cross presentation
(R-DRE-1236975)
Antigen processing: ubiquitination & proteasome degradation
(R-DRE-983168)
Assembly of the pre-replicative complex
(R-DRE-68867)
Asymmetric localization of pcp proteins
(R-DRE-4608870)
Auf1 (hnrnp d0) binds and destabilizes mrna
(R-DRE-450408)
Autodegradation of the e3 ubiquitin ligase cop1
(R-DRE-349425)
Beta-catenin independent wnt signaling
(R-DRE-3858494)
Cdk-mediated phosphorylation and removal of cdc6
(R-DRE-69017)
Cell cycle
(R-DRE-1640170)
Cell cycle, mitotic
(R-DRE-69278)
Cell cycle checkpoints
(R-DRE-69620)
Cellular responses to stimuli
(R-DRE-8953897)
Cellular responses to stress
(R-DRE-2262752)
Cellular response to chemical stress
(R-DRE-9711123)
Class i mhc mediated antigen processing & presentation
(R-DRE-983169)
Cross-presentation of soluble exogenous antigens (endosomes)
(R-DRE-1236978)
Cyclin a:cdk2-associated events at s phase entry
(R-DRE-69656)
Cyclin e associated events during g1/s transition
(R-DRE-69202)
Degradation of axin
(R-DRE-4641257)
Degradation of dvl
(R-DRE-4641258)
Degradation of gli1 by the proteasome
(R-DRE-5610780)
Deubiquitination
(R-DRE-5688426)
Dna replication
(R-DRE-69306)
Dna replication pre-initiation
(R-DRE-69002)
Downstream signaling events of b cell receptor (bcr)
(R-DRE-1168372)
Fbxl7 down-regulates aurka during mitotic entry and in early mitosis
(R-DRE-8854050)
G1/s dna damage checkpoints
(R-DRE-69615)
G1/s transition
(R-DRE-69206)
G2/m checkpoints
(R-DRE-69481)
G2/m transition
(R-DRE-69275)
Gene expression (transcription)
(R-DRE-74160)
Generic transcription pathway
(R-DRE-212436)
Gli3 is processed to gli3r by the proteasome
(R-DRE-5610785)
Gsk3b and btrc:cul1-mediated-degradation of nfe2l2
(R-DRE-9762114)
Hedgehog 'off' state
(R-DRE-5610787)
Hedgehog 'on' state
(R-DRE-5632684)
Hedgehog ligand biogenesis
(R-DRE-5358346)
Immune system
(R-DRE-168256)
Intracellular signaling by second messengers
(R-DRE-9006925)
Keap1-nfe2l2 pathway
(R-DRE-9755511)
Mapk6/mapk4 signaling
(R-DRE-5687128)
Mapk family signaling cascades
(R-DRE-5683057)
Metabolism
(R-DRE-1430728)
Metabolism of amino acids and derivatives
(R-DRE-71291)
Metabolism of polyamines
(R-DRE-351202)
Metabolism of proteins
(R-DRE-392499)
Metabolism of rna
(R-DRE-8953854)
Mitotic g1 phase and g1/s transition
(R-DRE-453279)
Mitotic g2-g2/m phases
(R-DRE-453274)
Neddylation
(R-DRE-8951664)
Nuclear events mediated by nfe2l2
(R-DRE-9759194)
P53-dependent g1 dna damage response
(R-DRE-69563)
P53-dependent g1/s dna damage checkpoint
(R-DRE-69580)
Pcp/ce pathway
(R-DRE-4086400)
Pip3 activates akt signaling
(R-DRE-1257604)
Post-translational protein modification
(R-DRE-597592)
Pten regulation
(R-DRE-6807070)
Regulation of mrna stability by proteins that bind au-rich elements
(R-DRE-450531)
Regulation of ornithine decarboxylase (odc)
(R-DRE-350562)
Regulation of pten stability and activity
(R-DRE-8948751)
Regulation of runx2 expression and activity
(R-DRE-8939902)
Regulation of runx3 expression and activity
(R-DRE-8941858)
Rna polymerase ii transcription
(R-DRE-73857)
Runx1 regulates transcription of genes involved in differentiation of hscs
(R-DRE-8939236)
Scf(skp2)-mediated degradation of p27/p21
(R-DRE-187577)
Signaling by hedgehog
(R-DRE-5358351)
Signaling by the b cell receptor (bcr)
(R-DRE-983705)
Signaling by wnt
(R-DRE-195721)
Signal transduction
(R-DRE-162582)
S phase
(R-DRE-69242)
Stabilization of p53
(R-DRE-69541)
Switching of origins to a post-replicative state
(R-DRE-69052)
Synthesis of dna
(R-DRE-69239)
Tcf dependent signaling in response to wnt
(R-DRE-201681)
The role of gtse1 in g2/m progression after g2 checkpoint
(R-DRE-8852276)
Transcriptional regulation by runx1
(R-DRE-8878171)
Transcriptional regulation by runx2
(R-DRE-8878166)
Transcriptional regulation by runx3
(R-DRE-8878159)
Transport of small molecules
(R-DRE-382551)
Ub-specific processing proteases
(R-DRE-5689880)
Ubiquitin-dependent degradation of cyclin d
(R-DRE-75815)
Uch proteinases
(R-DRE-5689603)
Cytoplasm
(GO:0005737)
Cytosol
(GO:0005829)
Endopeptidase activity
(GO:0004175)
Immune system process
(GO:0002376)
Nucleus
(GO:0005634)
Proteasome-mediated ubiquitin-dependent protein catabolic process
(GO:0043161)
Proteasome complex
(GO:0000502)
Proteasome core complex
(GO:0005839)
Proteasome core complex, beta-subunit complex
(GO:0019774)
Proteolysis involved in protein catabolic process
(GO:0051603)
Threonine-type endopeptidase activity
(GO:0004298)

Other Information

Proteins

O57332_DANRE

Genular Protein ID: 3153684139

Symbol: O57332_DANRE

Name: N/A

UniProtKB Accession Codes:

O57332

Database IDs:

Citations:

PubMed ID: 9550404

Title: Linkage of LMP, TAP, and RING3 with Mhc class I rather than class II genes in the zebrafish.

PubMed ID: 9550404

PubMed ID: 11814690

Title: Sequencing of amphioxus PSMB5/8 gene and phylogenetic position of agnathan sequences.

PubMed ID: 11814690

DOI: 10.1016/S0378-1119(01)00834-4

PubMed ID: 16466575

Title: Many genes in fish have species-specific asymmetric rates of molecular evolution.

PubMed ID: 16466575

PubMed ID: 19184727

Title: Transcriptional regulation in liver and testis associated with developmental and reproductive effects in male zebrafish exposed to natural mixtures of persistent organic pollutants (POP).

PubMed ID: 19184727

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 26469318

Title: RFX transcription factors are essential for hearing in mice.

PubMed ID: 26469318

PubMed ID: 27493218

Title: Alternative haplotypes of antigen processing genes in zebrafish diverged early in vertebrate evolution.

PubMed ID: 27493218

PubMed ID: 28252024

Title: Evolution of complexity in the zebrafish synapse proteome.

PubMed ID: 28252024

Sequence Information:

Length: 223
Mass: 24123
Checksum: 1B7258CAD584B897
Sequence:

MASTLNNYND LCPDWTQREV STGTTIMAVE FDGGVVMGAD SRTTTGAYIA NRVTDKLTPI 
HDRIFCCRSG SAADTQAIAD AVTYQLGFHS IELDEAPLVQ TAASLFRDMC YRYREELMAG 
IIVAGWDRRR GGQVYTVPVG GMLTRQPVSV GGSGSSYIYG YVDSNYRSGM SKEECLKFTA 
GALTLPMERD GSSGGVVRLA VISEQGVERQ AILGNQLPQF STV

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: psmb6

Associated with

Other Information

Linkage of LMP, TAP, and RING3 with Mhc class I rather than class II genes in the zebrafish. PubMed ID: 9550404

Sequencing of amphioxus PSMB5/8 gene and phylogenetic position of agnathan sequences. PubMed ID: 11814690

Many genes in fish have species-specific asymmetric rates of molecular evolution. PubMed ID: 16466575

Transcriptional regulation in liver and testis associated with developmental and reproductive effects in male zebrafish exposed to natural mixtures of persistent organic pollutants (POP). PubMed ID: 19184727

The zebrafish reference genome sequence and its relationship to the human genome. PubMed ID: 23594743

RFX transcription factors are essential for hearing in mice. PubMed ID: 26469318

Alternative haplotypes of antigen processing genes in zebrafish diverged early in vertebrate evolution. PubMed ID: 27493218

Evolution of complexity in the zebrafish synapse proteome. PubMed ID: 28252024