Details for: hoxa10b

Gene ID: 30391

Symbol: hoxa10b

Ensembl ID: ENSDARG00000031337

Description: homeobox A10b

Associated with

  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Nucleus
    (GO:0005634)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)

Other Information

Genular Protein ID: 845045689

Symbol: HXAAB_DANRE

Name: Homeobox protein Hox-A10b

UniProtKB Accession Codes:

Q8AWY2 O57357 Q4PRA5

Database IDs:

AlphaFoldDB 1 CDD 1 CTD 1 EMBL 3 GO 4 Gene3D 1 InParanoid 1 InterPro 5 KEGG 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PRINTS 1 PRO 1 PROSITE 2 PROSITE-ProRule 1 PaxDb 1 Pfam 1 PhylomeDB 1 Proteomes 1 RefSeq 1 SAM 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 ZFIN 1 eggNOG 1

Citations:

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 16174031

Title: Genomic annotation and transcriptome analysis of the zebrafish (Danio rerio) hox complex with description of a novel member, hoxb13a.

PubMed ID: 16174031

DOI: 10.1111/j.1525-142x.2005.05042.x

PubMed ID: 9425136

Title: Zebrafish hox genes: genomic organization and modified colinear expression patterns in the trunk.

PubMed ID: 9425136

DOI: 10.1242/dev.125.3.407

Sequence Information:

  • Length: 330
  • Mass: 36947
  • Checksum: 0236BAE98AAC37AC
  • Sequence:
    • MSCSDSPSGN SFLVDSLIHG RSEGSGHYYQ NSGVYLQPTS EYSYGLSNCG YFSGLKRNES 
NSQNVVPTCG PYQGMETWLE TSRSCRIEQP NSQITPRSFS PTIKEENSYC LYESEKCPKE 
TITEDISYSR LTPNSCPSSN NNGCVPVPGY FRLSQTCTTS KGFTDNQTIP THVVAQRSTR 
FDSSLSAIAA EASRDESDEP PTCAPCAPGR NKELRGSTGT ASSPEPPDSP EKAVTVTKAG 
DSKSESTANW LTAKSGRKKR CPYTKHQTLE LEKEFLFNMY LTRERRLEIS RSVHLTDRQV 
KIWFQNRRMK LKKMSRENRI RELSANFSFS

Genular Protein ID: 2464812835

Symbol: A0A8M2B4B4_DANRE

Name: N/A

UniProtKB Accession Codes:

A0A8M2B4B4

Database IDs:

ARBA 5 CDD 1 CTD 1 GO 3 Gene3D 1 InterPro 5 NCBI Taxonomy 1 PANTHER 2 PRINTS 1 PROSITE 3 PROSITE-ProRule 1 Pfam 1 Proteomes 2 RefSeq 2 RuleBase 1 SAM 1 SMART 1 SUPFAM 1 ZFIN 2

Citations:

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

Sequence Information:

  • Length: 346
  • Mass: 38779
  • Checksum: 03A1B31267DFB6FA
  • Sequence:
    • MSSRKGNLLP PSNYTTKMSC SDSPSGNSFL VDSLIHGRSE GSGHYYQNSG VYLQPTSEYS 
YGLSNCGYFS GLKRNESNSQ NVVPTCGPYQ GMETWLETSR SCRIEQPNNQ ITPRSFSPTI 
KEENSYCLYE SEKCPKETIT EDISYSRLTP NSCPSSNNNG CVPVPGYFRL SQTCTTSKGF 
TDNQTIPTHV VAQRSTRFDS SLSAIAAEAS RDESDEPPTC APCAPGRNKE LRGSTGTASS 
PEPPDSPEKA VTVTKGDSKS ESTANWLTAK SGRKKRCPYT KHQTLELEKE FLFNMYLTRE 
RRLEISRSVH LTDRQVKIWF QNRRMKLKKM SRENRIRELS ANFSFS

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.