Details for: hoxc11a

Gene ID: 30403

Symbol: hoxc11a

Ensembl ID: ENSDARG00000070351

Description: homeobox C11a

Associated with

  • Anatomical structure development
    (GO:0048856)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Nucleus
    (GO:0005634)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)

Other Information

Genular Protein ID: 3359906743

Symbol: HXCBA_DANRE

Name: Homeobox protein Hox-C11a

UniProtKB Accession Codes:

Q58EL0 O57366 Q4PR85 Q9YGT2

Database IDs:

AlphaFoldDB 1 Bgee 1 CDD 1 CTD 1 EMBL 8 ExpressionAtlas 1 GO 5 Gene3D 1 InParanoid 1 InterPro 5 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PRINTS 1 PRO 1 PROSITE 2 PROSITE-ProRule 1 PaxDb 1 Pfam 2 PhylomeDB 1 Proteomes 1 RefSeq 1 SAM 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 TreeFam 1 UniProtKB 1 ZFIN 2 eggNOG 1

Citations:

PubMed ID: 16174031

Title: Genomic annotation and transcriptome analysis of the zebrafish (Danio rerio) hox complex with description of a novel member, hoxb13a.

PubMed ID: 16174031

DOI: 10.1111/j.1525-142x.2005.05042.x

PubMed ID: 9831563

Title: Zebrafish hox clusters and vertebrate genome evolution.

PubMed ID: 9831563

DOI: 10.1126/science.282.5394.1711

PubMed ID: 9425136

Title: Zebrafish hox genes: genomic organization and modified colinear expression patterns in the trunk.

PubMed ID: 9425136

DOI: 10.1242/dev.125.3.407

Sequence Information:

  • Length: 306
  • Mass: 35169
  • Checksum: 6953CC6293A845EC
  • Sequence:
    • MFNSVNLGNF CSQTRKDRTS EFGDRTGCAS NIYLPSCTYY VPEFSAVSSF LPQGPSRQIT 
YPYSTNLSQV QPVRDVSYGL DPSSKWHHRS NYASCYSGED LVHRDCLPPS TMTEMLMKNE 
SVYSHHHQHH PNSSHPSTGF YTGVGKNNVL PQGFDRFFET AYCSTDNQSE HCLQKSEMNK 
LETSSQQPTA VSAAREPEKD PEDEEEHTNS GSCTSAATKD GNASKSSHSS TPRTRKKRCP 
YSKFQIRELE REFFFNVYIN KEKRLQLSRM LNLTDRQVKI WFQNRRMKEK KLSRDRLQYF 
SGNPLL

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.