Details for: hoxb8b

Gene ID: 30420

Symbol: hoxb8b

Ensembl ID: ENSDARG00000054025

Description: homeobox B8b

Associated with

  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Nucleus
    (GO:0005634)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii transcription regulatory region sequence-specific dna binding
    (GO:0000977)

Other Information

Genular Protein ID: 2277032510

Symbol: HXB8B_DANRE

Name: Homeobox protein Hox-B8b

UniProtKB Accession Codes:

Q8JH55 O57360 Q4PR94 Q9PWM1

Database IDs:

AlphaFoldDB 1 Bgee 1 CDD 1 CTD 1 EMBL 4 ExpressionAtlas 1 GO 4 Gene3D 1 HOGENOM 1 InParanoid 1 InterPro 5 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PRINTS 1 PRO 1 PROSITE 3 PROSITE-ProRule 1 PaxDb 1 Pfam 1 PhylomeDB 1 Proteomes 2 RefSeq 1 SAM 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 TreeFam 1 ZFIN 1 eggNOG 1

Citations:

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 16174031

Title: Genomic annotation and transcriptome analysis of the zebrafish (Danio rerio) hox complex with description of a novel member, hoxb13a.

PubMed ID: 16174031

DOI: 10.1111/j.1525-142x.2005.05042.x

PubMed ID: 9831563

Title: Zebrafish hox clusters and vertebrate genome evolution.

PubMed ID: 9831563

DOI: 10.1126/science.282.5394.1711

PubMed ID: 9425136

Title: Zebrafish hox genes: genomic organization and modified colinear expression patterns in the trunk.

PubMed ID: 9425136

DOI: 10.1242/dev.125.3.407

Sequence Information:

  • Length: 247
  • Mass: 28225
  • Checksum: 927D1AB037A1AA87
  • Sequence:
    • MSSYFVNSLF TKFKGGDSLR SNYYDCPSYT PDLGGRPSVL YGHNTGSAFQ HAAQFPDFYH 
HGTSSFPHAS YQQTPCAVAY PGDATGNILG QDGLQKQSFF GAPDSDFTQF GDCNLKVSGI 
RDDLESAEPC TAQLFPWMRP QATGRRRGRQ TYSRYQTLEL EKEFLFNPYL TRKRRIEVSH 
ALALTERQVK IWFQNRRMKW KKEHNKDKFP SSKAEQEEIE RERQEGSQVS EKHTSGEEDS 
EASSNSK

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.