Details for: lhx1b

Gene ID: 30454

Symbol: lhx1b

Ensembl ID: ENSDARG00000007944

Description: LIM homeobox 1b

Associated with

  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Metal ion binding
    (GO:0046872)
  • Neuron differentiation
    (GO:0030182)
  • Nucleus
    (GO:0005634)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii transcription regulatory region sequence-specific dna binding
    (GO:0000977)

Other Information

Genular Protein ID: 1377152935

Symbol: O13106_DANRE

Name: N/A

UniProtKB Accession Codes:

O13106 A0A0R4IPG0 A0A8N7XJ14 B3DG56

Database IDs:

ARBA 9 Bgee 1 CDD 3 CTD 1 EMBL 6 Ensembl 4 GO 7 Gene3D 2 HOGENOM 1 InterPro 4 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PROSITE 6 PROSITE-ProRule 2 PaxDb 1 Pfam 2 Proteomes 3 RefSeq 2 RuleBase 1 SAM 1 SMART 2 STRING 1 SUPFAM 2 TreeFam 1 ZFIN 2 eggNOG 1

Citations:

PubMed ID: 9264264

Title: lim6, a novel LIM homeobox gene in the zebrafish: comparison of its expression pattern with lim1.

PubMed ID: 9264264

DOI: 10.1002/(SICI)1097-0177(199708)209:4<406::AID-AJA8>3.3.CO;2-T

PubMed ID: 10207156

Title: A genetic linkage map for zebrafish: comparative analysis and localization of genes and expressed sequences.

PubMed ID: 10207156

PubMed ID: 16109975

Title: The zebrafish gene map defines ancestral vertebrate chromosomes.

PubMed ID: 16109975

PubMed ID: 19504456

Title: Identification of vasculature-specific genes by microarray analysis of Etsrp/Etv2 overexpressing zebrafish embryos.

PubMed ID: 19504456

DOI: 10.1002/dvdy.21990

PubMed ID: 19369545

Title: From the olfactory bulb to higher brain centers: genetic visualization of secondary olfactory pathways in zebrafish.

PubMed ID: 19369545

DOI: 10.1523/JNEUROSCI.0118-09.2009

PubMed ID: 20423468

Title: Pre-gastrula expression of zebrafish extraembryonic genes.

PubMed ID: 20423468

PubMed ID: 22728160

Title: Analysis of transcriptional codes for zebrafish dopaminergic neurons reveals essential functions of Arx and Isl1 in prethalamic dopaminergic neuron development.

PubMed ID: 22728160

PubMed ID: 21858823

Title: Subdivisions of the adult zebrafish subpallium by molecular marker analysis.

PubMed ID: 21858823

PubMed ID: 22931925

Title: Interferon regulatory factor 6 promotes differentiation of the periderm by activating expression of Grainyhead-like 3.

PubMed ID: 22931925

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 23437360

Title: Quantitative genetic analysis of retinal degeneration in the blind cavefish Astyanax mexicanus.

PubMed ID: 23437360

Sequence Information:

  • Length: 402
  • Mass: 44983
  • Checksum: 233E16D6B2FE15A7
  • Sequence:
    • MVHCAGCERP ILDRFLLSVL DRAWHAKCVQ CCDCKCSLTD RCFSREGRLY CKNDFFRRYG 
TKCGGCAQGI SPSDLVRKAR SKVFHLNCFT CIMCNKQLST GEELYILDEY KFVCKEDYLN 
NSNGKDTNLL SITTCSDPSL SPESQDPQDD YKDSESGPMS DKETCNNEND EQNLGGKRRG 
PRTTIKAKQL ETLKAAFAAT PKPTRHIREQ LAQETGLNMR VIQVWFQNRR SKERRMKQLS 
ALGARRHMFF RSPRRMRALG DRMEPGELMA NGHFSFYGDY QSEYYGPGSN YDYFPQGPPS 
SQAHTPGDLG FMPSSGPAGT PLGNMDPHHG AHHPSNDTQC FSEMISHHPG DSPSPEPSAP 
ASIHSISTDM CDSTPPFTSL NSLSANGYSN QLSSEMNEGT VW

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.