Details for: exorh

Gene ID: 30459

Symbol: exorh

Ensembl ID: ENSDARG00000103574

Description: extra-ocular rhodopsin

Associated with

Other Information

Genular Protein ID: 3686195932

Symbol: Q9PTX9_DANRE

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 10581404

Title: Exo-rhodopsin: a novel rhodopsin expressed in the zebrafish pineal gland.

PubMed ID: 10581404

DOI: 10.1016/S0169-328X(99)00242-9

PubMed ID: 11925012

Title: Molecular cloning and characterization of five opsin genes from the marine flatfish Atlantic halibut (Hippoglossus hippoglossus).

PubMed ID: 11925012

DOI: 10.1017/S095252380118510X

PubMed ID: 12487121

Title: Zebrafish melanopsin: isolation, tissue localisation and phylogenetic position.

PubMed ID: 12487121

DOI: 10.1016/S0169-328X(02)00454-0

PubMed ID: 12622837

Title: Genetic, temporal and developmental differences between melatonin rhythm generating systems in the teleost fish pineal organ and retina.

PubMed ID: 12622837

PubMed ID: 16497800

Title: Starting the zebrafish pineal circadian clock with a single photic transition.

PubMed ID: 16497800

PubMed ID: 16647808

Title: Mechanism of pineal-specific gene expression: the role of E-box and photoreceptor conserved elements.

PubMed ID: 16647808

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 26450929

Title: An extended family of novel vertebrate photopigments is widely expressed and displays a diversity of function.

PubMed ID: 26450929

DOI: 10.1101/gr.189886.115

PubMed ID: 27189481

Title: Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.

PubMed ID: 27189481

PubMed ID: 27862951

Title: Characterization and Evolution of the Spotted Gar Retina.

PubMed ID: 27862951

PubMed ID: 27811293

Title: A second visual rhodopsin gene, rh1-2, is expressed in zebrafish photoreceptors and found in other ray-finned fishes.

PubMed ID: 27811293

PubMed ID: 29945867

Title: Bsx controls pineal complex development. .

PubMed ID: 29945867

DOI: 10.1242/dev.163477

PubMed ID: 30703098

Title: A Notch-mediated, temporal asymmetry in BMP pathway activation promotes photoreceptor subtype diversification.

PubMed ID: 30703098

Sequence Information:

  • Length: 354
  • Mass: 39460
  • Checksum: A0172A432A875266
  • Sequence:
  • MNGTEGPNFY VPMSNRTGLV RSPFEEPQYY LAEPWQFSLL AAYMLFLILG SFPINALTLY 
    VTVQHKKLRT PLNYILLNLA VADLFMVLGG FTVTLYTALH GYFLLGVTGC NIEGFFATLG 
    GEIALWSLVV LAIERYIVVC KPMSTFRFGE KHAIIGVGFT WVMALTCAVP PLLGWSRYIP 
    EGMQCSCGID YYTPKPEVHN TSFVIYMFIL HFSIPLLIIF FCYSRLLCTV RAAAAQQQES 
    ETTQRAEREV TRMVVVMVIA FLVCWVPYAS VAWYIFANQG AEFGPVFMTV PAFFAKSAAL 
    YNPVIYIMLN RQFRNCMLST VCCGKNPLAE DESSSAVSSK TQSSVVSSAQ VSPA

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.