Details for: lhx1a

Gene ID: 30463

Symbol: lhx1a

Ensembl ID: ENSDARG00000014018

Description: LIM homeobox 1a

Associated with

  • Anterior/posterior axis specification
    (GO:0009948)
  • Cell-cell signaling
    (GO:0007267)
  • Cerebellar purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation
    (GO:0021937)
  • Cerebellar purkinje cell differentiation
    (GO:0021702)
  • Cerebellum development
    (GO:0021549)
  • Comma-shaped body morphogenesis
    (GO:0072049)
  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Dorsal/ventral pattern formation
    (GO:0009953)
  • Dorsal spinal cord interneuron posterior axon guidance
    (GO:0097379)
  • Ectoderm formation
    (GO:0001705)
  • Embryonic pattern specification
    (GO:0009880)
  • Embryonic retina morphogenesis in camera-type eye
    (GO:0060059)
  • Endoderm formation
    (GO:0001706)
  • Forebrain regionalization
    (GO:0021871)
  • Gastrulation with mouth forming second
    (GO:0001702)
  • Lateral motor column neuron migration
    (GO:0097477)
  • Metal ion binding
    (GO:0046872)
  • Motor neuron axon guidance
    (GO:0008045)
  • Negative regulation of dna-templated transcription
    (GO:0045892)
  • Nephric duct morphogenesis
    (GO:0072178)
  • Neuron differentiation
    (GO:0030182)
  • Nucleus
    (GO:0005634)
  • Paramesonephric duct development
    (GO:0061205)
  • Pattern specification process
    (GO:0007389)
  • Positive regulation of anterior head development
    (GO:2000744)
  • Positive regulation of branching involved in ureteric bud morphogenesis
    (GO:0090190)
  • Positive regulation of dna-templated transcription
    (GO:0045893)
  • Positive regulation of embryonic development
    (GO:0040019)
  • Positive regulation of gastrulation
    (GO:2000543)
  • Positive regulation of nephron tubule epithelial cell differentiation
    (GO:2000768)
  • Post-embryonic development
    (GO:0009791)
  • Primitive streak formation
    (GO:0090009)
  • Protein-containing complex
    (GO:0032991)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of gene expression
    (GO:0010468)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Renal vesicle morphogenesis
    (GO:0072077)
  • Retina layer formation
    (GO:0010842)
  • Rna polymerase ii transcription regulatory region sequence-specific dna binding
    (GO:0000977)
  • S-shaped body morphogenesis
    (GO:0072050)
  • Spinal cord association neuron differentiation
    (GO:0021527)
  • Transcription by rna polymerase ii
    (GO:0006366)
  • Ureteric bud development
    (GO:0001657)
  • Urogenital system development
    (GO:0001655)

Other Information

Genular Protein ID: 1386933712

Symbol: LHX1_DANRE

Name: LIM/homeobox protein Lhx1

UniProtKB Accession Codes:

Q90476

Database IDs:

AlphaFoldDB 1 Bgee 1 CDD 3 CTD 1 EMBL 1 ExpressionAtlas 1 GO 50 Gene3D 2 HOGENOM 1 InParanoid 1 InterPro 4 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PRO 1 PROSITE 4 PROSITE-ProRule 2 PaxDb 1 Pfam 2 PhylomeDB 1 Proteomes 1 RefSeq 1 SAM 1 SMART 2 SMR 1 STRING 1 SUPFAM 2 TreeFam 1 ZFIN 1 eggNOG 1

Citations:

PubMed ID: 7768180

Title: Nodal induces ectopic goosecoid and lim1 expression and axis duplication in zebrafish.

PubMed ID: 7768180

DOI: 10.1242/dev.121.2.383

Sequence Information:

  • Length: 405
  • Mass: 45154
  • Checksum: 186EEBEB59C88123
  • Sequence:
    • MVHCAGCERP ILDRFLLNVL DRAWHIKCVQ CCECKCNLTE KCFSREGKLY CKNDFFRRFG 
TKCAGCAQGI SPNDLVRRAR SKVFHLNCFT CMMCNKQLST GEELYIIDEN KFVCKDDYLS 
NTNGKDSNLL SVTACSDPSL SPDSQDQLQD DVKDAEIANL SDKETGNNEN DDQNLGGKRR 
GPRTTIKAKQ LETLKAAFAA TPKPTRHIRE QLAQETGLNM RVIQVWFQNR RSKERRMKQL 
SALGARRHAF FRSPRRMRTL VDRLEPGELI PNGPFSYYGD YQSEYYGPGG NYDFFPQGPP 
SSQAQTPVDL PFVPSSGPTG TPLGGMDHPI PGHHPSSEVQ RFSDIMSHHP GDSPSPEPGI 
PGPLHSMSSD VFGPSPSFTS LSLNGSGYSN HLSHPPSEMN EGTVW

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.