Details for: rx1

Gene ID: 30472

Symbol: rx1

Ensembl ID: ENSDARG00000071684

Description: retinal homeobox gene 1

Associated with

  • Camera-type eye photoreceptor cell differentiation
    (GO:0060219)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Neural retina development
    (GO:0003407)
  • Nucleus
    (GO:0005634)
  • Positive regulation of transcription by rna polymerase ii
    (GO:0045944)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Retina layer formation
    (GO:0010842)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)

Other Information

Genular Protein ID: 2890408569

Symbol: Q6P984_DANRE

Name: N/A

UniProtKB Accession Codes:

Q6P984 A0A8M1P796

Database IDs:

ARBA 8 Bgee 1 CDD 1 CTD 1 EMBL 3 Ensembl 4 GO 4 Gene3D 1 HOGENOM 1 InterPro 5 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PROSITE 5 PROSITE-ProRule 1 Pfam 2 Proteomes 2 RefSeq 2 RuleBase 1 SAM 1 SMART 1 SUPFAM 1 TreeFam 1 ZFIN 2

Citations:

PubMed ID: 10473141

Title: Expression of three Rx homeobox genes in embryonic and adult zebrafish.

PubMed ID: 10473141

PubMed ID: 12412019

Title: Embryonic retinal gene expression in sonic-you mutant zebrafish.

PubMed ID: 12412019

PubMed ID: 12223403

Title: Specification of an anterior neuroectoderm patterning by Frizzled8a-mediated Wnt8b signalling during late gastrulation in zebrafish.

PubMed ID: 12223403

PubMed ID: 12798293

Title: Extraretinal and retinal hedgehog signaling sequentially regulate retinal differentiation in zebrafish.

PubMed ID: 12798293

PubMed ID: 12538521

Title: Hedgehog signalling maintains the optic stalk-retinal interface through the regulation of Vax gene activity.

PubMed ID: 12538521

DOI: 10.1242/dev.00305

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 30056342

Title: Silver nanoparticles affect lens rather than retina development in zebrafish embryos.

PubMed ID: 30056342

PubMed ID: 30067812

Title: Retinal Wnt signaling defect in a zebrafish fetal alcohol spectrum disorder model.

PubMed ID: 30067812

PubMed ID: 29700229

Title: Single-cell mapping of gene expression landscapes and lineage in the zebrafish embryo.

PubMed ID: 29700229

PubMed ID: 30834156

Title: Znf76 is associated with development of the eyes, midbrain, MHB, and hindbrain in zebrafish embryos.

PubMed ID: 30834156

PubMed ID: 30695021

Title: Abrogation of Stem Loop Binding Protein (Slbp) function leads to a failure of cells to transition from proliferation to differentiation, retinal coloboma and midline axon guidance deficits.

PubMed ID: 30695021

Sequence Information:

  • Length: 330
  • Mass: 36892
  • Checksum: 15F9D44CD97D24AD
  • Sequence:
    • MHLSLDTMNM VDDSCLSPSN FHDMVKAGGA VVGTRVHSID VILGFNKDQD SLLNPGANAV 
AHKVGGESLG EPGKLDQRVQ PYGHLPPLRD GSEQPTFHDA DMFSNKCDGD LGDLRKAIES 
DSKSPDSADG EQPKKKHRRN RTTFTTYQLH ELERAFEKSH YPDVYSREEL AMKVNLPEVR 
VQVWFQNRRA KWRRQEKIDA STMKLHDSPM LSFNRPSMHP TVGPMNNSLP LDPWLPSPLS 
SATPVHSIPG FMGPTQGLQT GYPGHSFLSP PQPMAQSMQP MAPPPYQCPP PFTDKYPLED 
VDQRSSSIAA LRMKAKEHIQ SMDKTWQPMC

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.