Details for: otx1

Gene ID: 30500

Symbol: otx1

Ensembl ID: ENSDARG00000094992

Description: orthodenticle homeobox 1

Associated with

  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Inner ear morphogenesis
    (GO:0042472)
  • Lateral semicircular canal development
    (GO:0060875)
  • Nucleus
    (GO:0005634)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Retinal pigment epithelium development
    (GO:0003406)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)

Other Information

Genular Protein ID: 1965158894

Symbol: OTX1B_DANRE

Name: Homeobox protein OTX1 B

UniProtKB Accession Codes:

Q91994 Q7ZU54

Database IDs:

AlphaFoldDB 1 Bgee 1 CDD 1 CTD 1 EMBL 3 GO 7 Gene3D 1 HOGENOM 1 InParanoid 1 InterPro 6 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PIR 1 PRINTS 2 PRO 1 PROSITE 2 PROSITE-ProRule 1 PaxDb 1 Pfam 2 PhylomeDB 1 Proteomes 1 RefSeq 1 SAM 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 TreeFam 1 ZFIN 1 eggNOG 1

Citations:

PubMed ID: 7898305

Title: Different spatio-temporal expressions of three otx homeoprotein transcripts during zebrafish embryogenesis.

PubMed ID: 7898305

DOI: 10.1016/0169-328x(94)90004-3

PubMed ID: 7893604

Title: Expression of two zebrafish orthodenticle-related genes in the embryonic brain.

PubMed ID: 7893604

DOI: 10.1016/0925-4773(94)90062-0

PubMed ID: 8619954

Title: Expression pattern of two otx genes suggests a role in specifying anterior body structures in zebrafish.

PubMed ID: 8619954

Sequence Information:

  • Length: 323
  • Mass: 35208
  • Checksum: 19425671E6D31F10
  • Sequence:
    • MMSYLKQPPY AMNGLGLSGA AMDLLHPSVG YPATPRKQRR ERTTFTRSQL DILEALFAKT 
RYPDIFMREE VALKINLPES RVQVWFKNRR AKCRQQQQSG SSTKTRPAKK KSSPTRESTG 
SESSGQFTPP AVSSAGSSSS SSSSTNNTGI SSTSTSISTV SSIWSPAISP GSAPPSVSLP 
EPVAPSNTSC MQRSVSGTAS STYPMPYNQT TGYSQGYPTP SGSYFSGVDC GSYLAPMHSH 
HHPHQLSPMT ASSMPTHPHH HISQSSGHHH HHHHQAYSGT GLAFNSSDCL DYKEQTASSW 
KLNFNTTDCL DYKDQASWRF QVL

Genular Protein ID: 3780020740

Symbol: B2GNW8_DANRE

Name: N/A

UniProtKB Accession Codes:

B2GNW8

Database IDs:

ARBA 4 AlphaFoldDB 1 CDD 1 CTD 1 EMBL 2 GO 3 Gene3D 1 InterPro 6 KEGG 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PRINTS 2 PROSITE 3 PROSITE-ProRule 1 Pfam 2 RefSeq 1 RuleBase 1 SAM 1 SMART 1 SUPFAM 1 ZFIN 2

Sequence Information:

  • Length: 323
  • Mass: 35224
  • Checksum: 6F854A1C596DED93
  • Sequence:
    • MMSYLKQPPY AMNGLGLSGA AMDLLHPSVG YPATPRKQRR ERTTFTRSQL DILEALFAKT 
RYPDIFMREE VALKINLPES RVQVWFKNRR AKCRQQQQSG SSTKTRPAKK KSSPTRESTG 
SESSGQFTPP AVSSAGSSSS SSSSTNNTGI CSTSTSISTV SSIWSPAISP GSAPPSVSLP 
EPVAPSNTSC MQRSVSGTAS STYPMPYNQT TGYSQGYPTP SGSYFSGVDC GSYLAPMHSH 
HHPHQLSPMT ASSMPTHPHH HISQSSGHHH HHHHQAYSGT GLAFNSSDCL DYKEQTASSW 
KLNFNTTDCL DYKDQASWRF QVL

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.