Details for: opn1mw1

Gene ID: 30503

Symbol: opn1mw1

Ensembl ID: ENSDARG00000097008

Description: opsin 1 (cone pigments), medium-wave-sensitive, 1

Associated with

Other Information

Genular Protein ID: 1990498209

Symbol: OPSG1_DANRE

Name: Green-sensitive opsin-1

UniProtKB Accession Codes:

Q9W6A5 Q8AYM9

Database IDs:

AlphaFoldDB 1 Bgee 1 CTD 1 EMBL 4 ExpressionAtlas 1 GO 8 Gene3D 1 GlyCosmos 1 HOGENOM 1 InParanoid 1 InterPro 6 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PRINTS 3 PRO 1 PROSITE 3 PROSITE-ProRule 1 PaxDb 1 Pfam 2 PhylomeDB 1 Proteomes 1 RefSeq 1 SAM 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 TreeFam 1 ZFIN 1 eggNOG 1

Citations:

PubMed ID: 10349976

Title: Cloning and characterization of six zebrafish photoreceptor opsin cDNAs and immunolocalization of their corresponding proteins.

PubMed ID: 10349976

DOI: 10.1017/s0952523899163168

PubMed ID: 12618404

Title: Gene duplication and spectral diversification of cone visual pigments of zebrafish.

PubMed ID: 12618404

DOI: 10.1093/genetics/163.2.663

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

Sequence Information:

  • Length: 349
  • Mass: 38844
  • Checksum: 0620B718F5C3F04B
  • Sequence:
    • MNGTEGSNFY IPMSNRTGLV RSPYDYTQYY LAEPWKFKAL AFYMFLLIIF GFPINVLTLV 
VTAQHKKLRQ PLNYILVNLA FAGTIMVIFG FTVSFYCSLV GYMALGPLGC VMEGFFATLG 
GQVALWSLVV LAIERYIVVC KPMGSFKFSA NHAMAGIAFT WFMACSCAVP PLFGWSRYLP 
EGMQTSCGPD YYTLNPEYNN ESYVMYMFSC HFCIPVTTIF FTYGSLVCTV KAAAAQQQES 
ESTQKAEREV TRMVILMVLG FLFAWVPYAS FAAWIFFNRG AAFSAQAMAV PAFFSKTSAV 
FNPIIYVLLN KQFRSCMLNT LFCGKSPLGD DESSSVSTSK TEVSSVSPA

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.