Details for: foxa

Gene ID: 30539

Symbol: foxa

Ensembl ID: ENSDARG00000087094

Description: forkhead box A sequence

Associated with

  • Anatomical structure morphogenesis
    (GO:0009653)
  • Cell differentiation
    (GO:0030154)
  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Nucleus
    (GO:0005634)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)
  • Sequence-specific dna binding
    (GO:0043565)

Other Information

Genular Protein ID: 420001259

Symbol: A0A0R4IHN9_DANRE

Name: N/A

UniProtKB Accession Codes:

A0A0R4IHN9 A0A8M6Z9D5

Database IDs:

ARBA 2 Bgee 1 CTD 1 EMBL 1 Ensembl 3 GO 6 Gene3D 1 InterPro 5 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PRINTS 1 PROSITE 4 PROSITE-ProRule 1 Pfam 1 Proteomes 2 RefSeq 2 SAM 1 SMART 1 SUPFAM 1 ZFIN 2

Citations:

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

Sequence Information:

  • Length: 335
  • Mass: 37530
  • Checksum: A9F3A4F0A287BC72
  • Sequence:
    • MYYGSDSLPL GPRGYSPPEH HYQSYGVQCD SAPAVNPGRL GSPAGLLPPA NPPKAYAEIN 
SSEPEFQELK SVYRRTLSHA KPPYSYISLI CMAIQQSPAK RLTLNEIYDW IRQLFPYYRQ 
NQQRWQNSIR HSLSFNDCFV RVPRSPDSPG KGSYWALHPD SGNMFENGCY MRRQKRFKCQ 
KSTSTGKNSE GEDVKVEKKK KKEIKSVSSC KSPTSDATKQ SSTTVSYANT KPASPSHLNP 
SHTLFPTQPP EISTHLPSLS VPFPASMETS LHCEPSSQHQ PISVPRLVDF QYCETPVSYP 
LYCQSNSHAN FPSYTTDSVY YPGFSMCSTP LLSSS

Genular Protein ID: 311588692

Symbol: F1QC30_DANRE

Name: N/A

UniProtKB Accession Codes:

F1QC30 A0A8M1PB28

Database IDs:

ARBA 2 Bgee 1 CTD 1 EMBL 1 Ensembl 3 GO 6 Gene3D 1 InterPro 5 KEGG 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PRINTS 1 PROSITE 4 PROSITE-ProRule 1 Pfam 1 Proteomes 3 RefSeq 2 SAM 1 SMART 1 STRING 1 SUPFAM 1 ZFIN 2

Citations:

PubMed ID: 9683740

Title: fork head domain genes in zebrafish.

PubMed ID: 9683740

DOI: 10.1007/s004270050179

PubMed ID: 10529416

Title: Bmp activity establishes a gradient of positional information throughout the entire neural plate.

PubMed ID: 10529416

PubMed ID: 10694427

Title: Two distinct cell populations in the floor plate of the zebrafish are induced by different pathways.

PubMed ID: 10694427

PubMed ID: 11922991

Title: The early embryonic zebrafish forebrain is subdivided into molecularly distinct transverse and longitudinal domains.

PubMed ID: 11922991

PubMed ID: 14678833

Title: The basic helix-loop-helix transcription factor, Tal2, marks the lateral floor plate of the spinal cord in zebrafish.

PubMed ID: 14678833

DOI: 10.1016/S1567-133X(03)00145-5

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 25995451

Title: Apela Regulates Fluid Homeostasis by Binding to the APJ Receptor to Activate Gi Signaling.

PubMed ID: 25995451

PubMed ID: 28887318

Title: UbcD1 regulates Hedgehog signaling by directly modulating Ci ubiquitination and processing.

PubMed ID: 28887318

PubMed ID: 28777795

Title: Regulation of Gli ciliary localization and Hedgehog signaling by the PY-NLS/karyopherin-beta2 nuclear import system.

PubMed ID: 28777795

PubMed ID: 29754802

Title: Intracellular Calcium Mobilization Is Required for Sonic Hedgehog Signaling.

PubMed ID: 29754802

PubMed ID: 30060229

Title: The genetic program of oocytes can be modified in vivo in the zebrafish ovary.

PubMed ID: 30060229

Sequence Information:

  • Length: 355
  • Mass: 40032
  • Checksum: 5F89636664A58129
  • Sequence:
    • MIDEVKRERG DQWMPYYSSE MYYGSDSLPL GPRGYSPPEH HYQSYGVQCD SAPAVNPGRL 
GSPAGLLPPA NPPKAYAEIN SSEPEFQELK SVYRRTLSHA KPPYSYISLI CMAIQQSPAK 
RLTLNEIYDW IRQLFPYYRQ NQQRWQNSIR HSLSFNDCFV RVPRSPDSPG KGSYWALHPD 
SGNMFENGCY MRRQKRFKCQ KSTSTGKNSE GEDVKVEKKK KKEIKSVSSC KSPTSDATKQ 
SSTTVSYANT KPASPSHLNP SHTLFPTQPP EISTHLPSLS VPFPASMETS LHCEPSSQHQ 
PISVPRLVDF QYCETPVSYP LYCQSNSHAN FPSYTTDSVY YPGFSMCSTP LLSSS

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.