Details for: sox21a

Gene ID: 30543

Symbol: sox21a

Ensembl ID: ENSDARG00000031664

Description: SRY-box transcription factor 21a

Associated with

Other Information

Genular Protein ID: 1936696752

Symbol: SX21A_DANRE

Name: N/A

UniProtKB Accession Codes:

Q7SZS1 Q804S0 Q9PVF6 Q9YH21

Database IDs:

AlphaFoldDB 1 CDD 1 CTD 1 EMBL 9 GO 12 Gene3D 1 InParanoid 1 InterPro 3 KEGG 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PRO 1 PROSITE 1 PROSITE-ProRule 1 PaxDb 1 Pfam 2 PhylomeDB 1 Proteomes 2 Reactome 1 RefSeq 1 SMART 1 SMR 1 STRING 1 SUPFAM 1 TreeFam 1 UniProtKB 1 ZFIN 2 eggNOG 1

Citations:

PubMed ID: 10370117

Title: sox30: a novel zebrafish sox gene expressed in a restricted manner at the midbrain-hindbrain boundary during neurogenesis.

PubMed ID: 10370117

DOI: 10.1007/s004270050264

PubMed ID: 10559493

Title: Expression patterns of zebrafish sox11A, sox11B and sox21.

PubMed ID: 10559493

DOI: 10.1016/s0925-4773(99)00199-9

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 15037315

Title: Ectopic expression and knockdown of a zebrafish sox21 reveal its role as a transcriptional repressor in early development.

PubMed ID: 15037315

DOI: 10.1016/j.mod.2004.01.001

PubMed ID: 11071752

Title: Phylogeny of the SOX family of developmental transcription factors based on sequence and structural indicators.

PubMed ID: 11071752

DOI: 10.1006/dbio.2000.9883

Sequence Information:

  • Length: 239
  • Mass: 26528
  • Checksum: 4D33ABAD8CD6449B
  • Sequence:
    • MAKPMDHVKR PMNAFMVWSR AQRRKMALDN PKMHNSEISK RLGGEWKLLS DSEKRPFIDE 
AKRLRAVHMK EHPDYKYRPR RKPKNLIKKD RYHFNVTYNL GEGDPLKSAR LSGDALSDSL 
SAEKTSVAAA ATRMFFSHHL SANPYPFLDL NSKISELPPA PFPHYSVLGY PSGLPAFPGM 
GVLAGAPHAH PSAGSPGHML PYNCLGWPGS GPAVPSSYVL LPGMTKAQHE PYLAYAATI

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.