psmb9a | ENSDARG00000000656 | NCBI 30665

Details for: psmb9a

Gene ID: 30665

Symbol: psmb9a

Ensembl ID: ENSDARG00000000656

Description: proteasome 20S subunit beta 9a

Associated with

Abc-family proteins mediated transport
(R-DRE-382556)
Activation of nf-kappab in b cells
(R-DRE-1169091)
Adaptive immune system
(R-DRE-1280218)
Antigen processing-cross presentation
(R-DRE-1236975)
Antigen processing: ubiquitination & proteasome degradation
(R-DRE-983168)
Assembly of the pre-replicative complex
(R-DRE-68867)
Asymmetric localization of pcp proteins
(R-DRE-4608870)
Auf1 (hnrnp d0) binds and destabilizes mrna
(R-DRE-450408)
Autodegradation of the e3 ubiquitin ligase cop1
(R-DRE-349425)
Beta-catenin independent wnt signaling
(R-DRE-3858494)
Cdk-mediated phosphorylation and removal of cdc6
(R-DRE-69017)
Cell cycle
(R-DRE-1640170)
Cell cycle, mitotic
(R-DRE-69278)
Cell cycle checkpoints
(R-DRE-69620)
Cellular responses to stimuli
(R-DRE-8953897)
Cellular responses to stress
(R-DRE-2262752)
Cellular response to chemical stress
(R-DRE-9711123)
Class i mhc mediated antigen processing & presentation
(R-DRE-983169)
Cross-presentation of soluble exogenous antigens (endosomes)
(R-DRE-1236978)
Cyclin a:cdk2-associated events at s phase entry
(R-DRE-69656)
Cyclin e associated events during g1/s transition
(R-DRE-69202)
Degradation of axin
(R-DRE-4641257)
Degradation of dvl
(R-DRE-4641258)
Degradation of gli1 by the proteasome
(R-DRE-5610780)
Deubiquitination
(R-DRE-5688426)
Dna replication
(R-DRE-69306)
Dna replication pre-initiation
(R-DRE-69002)
Downstream signaling events of b cell receptor (bcr)
(R-DRE-1168372)
Fbxl7 down-regulates aurka during mitotic entry and in early mitosis
(R-DRE-8854050)
G1/s dna damage checkpoints
(R-DRE-69615)
G1/s transition
(R-DRE-69206)
G2/m checkpoints
(R-DRE-69481)
G2/m transition
(R-DRE-69275)
Gene expression (transcription)
(R-DRE-74160)
Generic transcription pathway
(R-DRE-212436)
Gli3 is processed to gli3r by the proteasome
(R-DRE-5610785)
Gsk3b and btrc:cul1-mediated-degradation of nfe2l2
(R-DRE-9762114)
Hedgehog 'off' state
(R-DRE-5610787)
Hedgehog 'on' state
(R-DRE-5632684)
Hedgehog ligand biogenesis
(R-DRE-5358346)
Immune system
(R-DRE-168256)
Intracellular signaling by second messengers
(R-DRE-9006925)
Keap1-nfe2l2 pathway
(R-DRE-9755511)
Mapk6/mapk4 signaling
(R-DRE-5687128)
Mapk family signaling cascades
(R-DRE-5683057)
Metabolism
(R-DRE-1430728)
Metabolism of amino acids and derivatives
(R-DRE-71291)
Metabolism of polyamines
(R-DRE-351202)
Metabolism of proteins
(R-DRE-392499)
Metabolism of rna
(R-DRE-8953854)
Mitotic g1 phase and g1/s transition
(R-DRE-453279)
Mitotic g2-g2/m phases
(R-DRE-453274)
Neddylation
(R-DRE-8951664)
Nuclear events mediated by nfe2l2
(R-DRE-9759194)
P53-dependent g1 dna damage response
(R-DRE-69563)
P53-dependent g1/s dna damage checkpoint
(R-DRE-69580)
Pcp/ce pathway
(R-DRE-4086400)
Pip3 activates akt signaling
(R-DRE-1257604)
Post-translational protein modification
(R-DRE-597592)
Pten regulation
(R-DRE-6807070)
Regulation of mrna stability by proteins that bind au-rich elements
(R-DRE-450531)
Regulation of ornithine decarboxylase (odc)
(R-DRE-350562)
Regulation of pten stability and activity
(R-DRE-8948751)
Regulation of runx2 expression and activity
(R-DRE-8939902)
Regulation of runx3 expression and activity
(R-DRE-8941858)
Rna polymerase ii transcription
(R-DRE-73857)
Runx1 regulates transcription of genes involved in differentiation of hscs
(R-DRE-8939236)
Scf(skp2)-mediated degradation of p27/p21
(R-DRE-187577)
Signaling by hedgehog
(R-DRE-5358351)
Signaling by the b cell receptor (bcr)
(R-DRE-983705)
Signaling by wnt
(R-DRE-195721)
Signal transduction
(R-DRE-162582)
S phase
(R-DRE-69242)
Stabilization of p53
(R-DRE-69541)
Switching of origins to a post-replicative state
(R-DRE-69052)
Synthesis of dna
(R-DRE-69239)
Tcf dependent signaling in response to wnt
(R-DRE-201681)
The role of gtse1 in g2/m progression after g2 checkpoint
(R-DRE-8852276)
Transcriptional regulation by runx1
(R-DRE-8878171)
Transcriptional regulation by runx2
(R-DRE-8878166)
Transcriptional regulation by runx3
(R-DRE-8878159)
Transport of small molecules
(R-DRE-382551)
Ub-specific processing proteases
(R-DRE-5689880)
Ubiquitin-dependent degradation of cyclin d
(R-DRE-75815)
Uch proteinases
(R-DRE-5689603)
Cellular response to lipopolysaccharide
(GO:0071222)
Cellular response to molecule of bacterial origin
(GO:0071219)
Cytoplasm
(GO:0005737)
Cytosol
(GO:0005829)
Endopeptidase activity
(GO:0004175)
Immune system process
(GO:0002376)
Nucleus
(GO:0005634)
Proteasome-mediated ubiquitin-dependent protein catabolic process
(GO:0043161)
Proteasome complex
(GO:0000502)
Proteasome core complex
(GO:0005839)
Proteasome core complex, beta-subunit complex
(GO:0019774)
Proteolysis involved in protein catabolic process
(GO:0051603)
Threonine-type endopeptidase activity
(GO:0004298)

Other Information

Proteins

Q9PUS3_DANRE

Genular Protein ID: 93120640

Symbol: Q9PUS3_DANRE

Name: N/A

UniProtKB Accession Codes:

Q9PUS3 Q1LWX9

Database IDs:

Citations:

PubMed ID: 10453006

Title: Analysis of a 26-kb region linked to the Mhc in zebrafish: genomic organization of the proteasome component beta/transporter associated with antigen processing-2 gene cluster and identification of five new proteasome beta subunit genes.

PubMed ID: 10453006

PubMed ID: 11814690

Title: Sequencing of amphioxus PSMB5/8 gene and phylogenetic position of agnathan sequences.

PubMed ID: 11814690

DOI: 10.1016/S0378-1119(01)00834-4

PubMed ID: 12869198

Title: Structure, linkage mapping and expression of the heart-type fatty acid-binding protein gene (fabp3) from zebrafish (Danio rerio).

PubMed ID: 12869198

DOI: 10.1046/j.1432-1033.2003.03705.x

PubMed ID: 16109975

Title: The zebrafish gene map defines ancestral vertebrate chromosomes.

PubMed ID: 16109975

PubMed ID: 16448862

Title: Characterization of retinoid-X receptor genes rxra, rxrba, rxrbb and rxrg during zebrafish development.

PubMed ID: 16448862

DOI: 10.1016/j.modgep.2005.10.005

PubMed ID: 19159490

Title: Positive correlation between gene coexpression and positional clustering in the zebrafish genome.

PubMed ID: 19159490

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 27539703

Title: Analysis of interferon gamma protein expression in zebrafish (Danio rerio).

PubMed ID: 27539703

PubMed ID: 27409813

Title: Unexpected role of interferon-gamma in regulating neuronal connectivity and social behaviour.

PubMed ID: 27409813

PubMed ID: 27493218

Title: Alternative haplotypes of antigen processing genes in zebrafish diverged early in vertebrate evolution.

PubMed ID: 27493218

PubMed ID: 28698226

Title: Loss of DNA methylation in zebrafish embryos activates retrotransposons to trigger antiviral signaling.

PubMed ID: 28698226

PubMed ID: 29471808

Title: Whole genome duplications have provided teleosts with many roads to peptide loaded MHC class I molecules.

PubMed ID: 29471808

Sequence Information:

Length: 218
Mass: 23432
Checksum: 963C1C58A2205648
Sequence:

MSEELFPEPG WLSEEVKTGT TIIAVTFDGG VVIGSDSRVS AGESVVNRVM NKLSPLHDKI 
YCALSGSAAD AQTIAEIVNY QLDVHSIEVE DDPLVCSAAT LVKNISYKYK EELSAHLIVA 
GWDKKGGGQV YATLSGLLTK QPFAIGGSGS FYINGFVDAE YKKNMTKREC QEFVVNALTL 
AMGRDGSSGG VAYVVTIDKD GTEEKCVLGN ELPKFFDE

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: psmb9a

Associated with

Other Information

Analysis of a 26-kb region linked to the Mhc in zebrafish: genomic organization of the proteasome component beta/transporter associated with antigen processing-2 gene cluster and identification of five new proteasome beta subunit genes. PubMed ID: 10453006

Sequencing of amphioxus PSMB5/8 gene and phylogenetic position of agnathan sequences. PubMed ID: 11814690

Structure, linkage mapping and expression of the heart-type fatty acid-binding protein gene (fabp3) from zebrafish (Danio rerio). PubMed ID: 12869198

The zebrafish gene map defines ancestral vertebrate chromosomes. PubMed ID: 16109975

Characterization of retinoid-X receptor genes rxra, rxrba, rxrbb and rxrg during zebrafish development. PubMed ID: 16448862

Positive correlation between gene coexpression and positional clustering in the zebrafish genome. PubMed ID: 19159490

The zebrafish reference genome sequence and its relationship to the human genome. PubMed ID: 23594743

Analysis of interferon gamma protein expression in zebrafish (Danio rerio). PubMed ID: 27539703

Unexpected role of interferon-gamma in regulating neuronal connectivity and social behaviour. PubMed ID: 27409813

Alternative haplotypes of antigen processing genes in zebrafish diverged early in vertebrate evolution. PubMed ID: 27493218

Loss of DNA methylation in zebrafish embryos activates retrotransposons to trigger antiviral signaling. PubMed ID: 28698226

Whole genome duplications have provided teleosts with many roads to peptide loaded MHC class I molecules. PubMed ID: 29471808