Details for: tefa

Gene ID: 30674

Symbol: tefa

Ensembl ID: ENSDARG00000039117

Description: TEF transcription factor, PAR bZIP family member a

Associated with

  • Cellular response to light stimulus
    (GO:0071482)
  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Nucleus
    (GO:0005634)
  • Positive regulation of dna-templated transcription
    (GO:0045893)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii cis-regulatory region sequence-specific dna binding
    (GO:0000978)

Other Information

Genular Protein ID: 1157208970

Symbol: O57673_DANRE

Name: N/A

UniProtKB Accession Codes:

O57673 A0A8M2B252

Database IDs:

ARBA 3 Bgee 1 CDD 1 CTD 1 DNASU 1 EMBL 4 Ensembl 4 GO 6 Gene3D 1 HOGENOM 1 InterPro 3 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PROSITE 2 Pfam 1 Proteomes 2 RefSeq 2 SAM 2 SMART 1 SUPFAM 1 ZFIN 2

Citations:

PubMed ID: 9434145

Title: Cloning and characterization of two isoforms of the zebrafish thyrotroph embryonic factor (tef alpha and tefbeta).

PubMed ID: 9434145

DOI: 10.1016/S0167-4781(97)00150-4

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

Sequence Information:

  • Length: 293
  • Mass: 32977
  • Checksum: 08F873367EAABF54
  • Sequence:
    • MSSEIPEIFK ALLEYPFSLP SIDDNENDKE KLFESVESGG VSEMGPSAAL TPAIWEKTIP 
YDGDTFHLEY MDLEEFLMEN GIAAAENEQK SSEKENIQLT AEEPSTASAV KTAPAVTLLP 
VMALDPCEEE VVTITTSSSS SADNKSEENR MTPDPINPDE IEVDVNFEPD PTDLVLSSIP 
GGELFDPRKH RFSEEELKPQ PMIKKAKKVF VPEDQKDDKY WQRRKKNNVA AKRSRDARRL 
KENQITVRAA FLERENSALR QEVAELRKDF GRCKNTVARY EAKYGALGPE EDV

Genular Protein ID: 3684366632

Symbol: A0A8M2B278_DANRE

Name: N/A

UniProtKB Accession Codes:

A0A8M2B278

Database IDs:

ARBA 3 CDD 1 CTD 1 GO 3 Gene3D 1 InterPro 3 NCBI Taxonomy 1 PANTHER 2 PROSITE 2 Pfam 1 Proteomes 2 RefSeq 2 SAM 2 SMART 1 SUPFAM 1 ZFIN 2

Citations:

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

Sequence Information:

  • Length: 306
  • Mass: 34149
  • Checksum: CF031B95C8BC8680
  • Sequence:
    • MKPISITMDA GAETSAAFPV VLKKIMETPP PNLLEGDDEN DKEKLFESVE SGGVSEMGPS 
AALTPAIWEK TIPYDGDTFH LEYMDLEEFL MENGIAAAEN EQKSSEKENI QLTAEEPSTA 
SAVKTAPAVT LLPVMALDPC EEEVVTITTS SSSSADNKSE ENRMTPDPIN PDEIEVDVNF 
EPDPTDLVLS SIPGGELFDP RKHRFSEEEL KPQPMIKKAK KVFVPEDQKD DKYWQRRKKN 
NVAAKRSRDA RRLKENQITV RAAFLERENS ALRQEVAELR KDFGRCKNTV ARYEAKYGAL 
GPEEDV

Genular Protein ID: 1313721550

Symbol: Q9W722_DANRE

Name: N/A

UniProtKB Accession Codes:

Q9W722 A0A8N7UZK1

Database IDs:

ARBA 3 Bgee 1 CDD 1 CTD 1 DNASU 1 EMBL 4 Ensembl 4 GO 6 Gene3D 1 InterPro 3 KEGG 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PROSITE 2 PaxDb 1 Pfam 1 Proteomes 3 RefSeq 2 SAM 2 SMART 1 STRING 1 SUPFAM 1 TreeFam 1 ZFIN 2 eggNOG 1

Citations:

PubMed ID: 9434145

Title: Cloning and characterization of two isoforms of the zebrafish thyrotroph embryonic factor (tef alpha and tefbeta).

PubMed ID: 9434145

DOI: 10.1016/S0167-4781(97)00150-4

PubMed ID: 16109975

Title: The zebrafish gene map defines ancestral vertebrate chromosomes.

PubMed ID: 16109975

PubMed ID: 19500364

Title: Temporal pattern of loss/persistence of duplicate genes involved in signal transduction and metabolic pathways after teleost-specific genome duplication.

PubMed ID: 19500364

PubMed ID: 19859524

Title: Light directs zebrafish period2 expression via conserved D and E boxes.

PubMed ID: 19859524

DOI: 10.1371/journal.pbio.1000223

PubMed ID: 20854132

Title: Multiple PAR and E4BP4 bZIP transcription factors in zebrafish: diverse spatial and temporal expression patterns.

PubMed ID: 20854132

DOI: 10.3109/07420528.2010.510229

PubMed ID: 20830285

Title: Thyrotroph embryonic factor regulates light-induced transcription of repair genes in zebrafish embryonic cells.

PubMed ID: 20830285

PubMed ID: 23594743

Title: The zebrafish reference genome sequence and its relationship to the human genome.

PubMed ID: 23594743

DOI: 10.1038/nature12111

PubMed ID: 26161812

Title: Environmental Progestins Progesterone and Drospirenone Alter the Circadian Rhythm Network in Zebrafish (Danio rerio).

PubMed ID: 26161812

PubMed ID: 26950095

Title: The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons.

PubMed ID: 26950095

PubMed ID: 26899944

Title: Progestins alter photo-transduction cascade and circadian rhythm network in eyes of zebrafish (Danio rerio).

PubMed ID: 26899944

PubMed ID: 28617195

Title: Light- and clock-control of genes involved in detoxification.

PubMed ID: 28617195

PubMed ID: 28212399

Title: Instrument design and protocol for the study of light controlled processes in aquatic organisms, and its application to examine the effect of infrared light on zebrafish.

PubMed ID: 28212399

Sequence Information:

  • Length: 300
  • Mass: 33523
  • Checksum: 2680CF628ED15EB1
  • Sequence:
    • MKPISITMDA GAETSAAFPV VLKKIMETPP PNLLEGDDEN DKEKLFESVE SGGVSEMGPS 
AALTPAIWEK TIPYDGDTFH LEYMDLEEFL MENGIAAAEN EQKSSEKENI QLTAEEPSTA 
SAVKTAPAVT LLPVMALDPC EEEVVTITTS SSSSADNKSE ENRMTPDPIN PDEIEVDVNF 
EPDPTDLVLS SIPGGELFDP RKHRFSEEEL KPQPMIKKAK KVFVPEDQKD DKYWQRRKKN 
NVAAKRSRDA RRLKENQITV RAAFLERENS ALRQEVAELR KDFGRCKNTV ARYEAKYGAL

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.