Details for: tko

Gene ID: 31228

Symbol: tko

Ensembl ID: FBgn0003714

Description: technical knockout

Associated with

Other Information

Genular Protein ID: 1443660194

Symbol: RT12_DROME

Name: 40S ribosomal protein S12, mitochondrial

UniProtKB Accession Codes:

P10735 Q5U1D4 Q9NEH6 Q9U1J6 Q9V3R2

Database IDs:

AGR 1 AlphaFoldDB 1 Bgee 1 BioGRID 1 BioGRID-ORCS 1 CDD 1 CTD 1 DIP 1 DNASU 1 EMBL 6 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 1 GO 11 Gene3D 1 GeneTree 1 Genevisible 1 GenomeRNAi 1 HOGENOM 1 InParanoid 1 IntAct 1 InterPro 3 KEGG 1 NCBI Taxonomy 1 NCBIfam 1 OMA 1 OrthoDB 1 PANTHER 2 PIR 1 PRINTS 1 PRO 1 PROSITE 1 PaxDb 1 Pfam 1 PhylomeDB 1 Proteomes 1 Reactome 2 RefSeq 2 SMR 1 STRING 1 SUPFAM 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 3117373

Title: The tko locus, site of a behavioral mutation in D. melanogaster, codes for a protein homologous to prokaryotic ribosomal protein S12.

PubMed ID: 3117373

DOI: 10.1016/0092-8674(87)90144-9

PubMed ID: 16120347

Title: Gene dosage and selective expression modify phenotype in a Drosophila model of human mitochondrial disease.

PubMed ID: 16120347

DOI: 10.1016/s1567-7249(03)00077-1

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 10731137

Title: From sequence to chromosome: the tip of the X chromosome of D. melanogaster.

PubMed ID: 10731137

DOI: 10.1126/science.287.5461.2220

Sequence Information:

  • Length: 140
  • Mass: 15532
  • Checksum: 8187A7312C529F31
  • Sequence:
    • MNFLRQSFGI TKQLASQAIQ CSYETAVRGM ASLQQMHRSG PHIKTRPPRQ PLDGKPFAKG 
VVLKTLIKKP KKPNSANRKC VLVRLSTGKE MVAYIPGIGH NLQEHNIVLC RVGRLQDVPG 
VKLKAVRGVY DLAHVVKKSQ

Genular Protein ID: 3485320980

Symbol: D3DMP8_DROME

Name: N/A

UniProtKB Accession Codes:

D3DMP8

Database IDs:

AGR 1 ARBA 1 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 DNASU 1 EMBL 4 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 3 Gene3D 1 GeneTree 1 GenomeRNAi 1 InterPro 3 NCBI Taxonomy 1 NCBIfam 1 OrthoDB 1 PANTHER 2 PRINTS 1 PROSITE 1 Pfam 1 Proteomes 2 RefSeq 1 SMR 1 SUPFAM 1 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

PubMed ID: 26109357

Title: Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

PubMed ID: 26109357

DOI: .1534/g3.115.018929

PubMed ID: 26109356

Title: Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

PubMed ID: 26109356

DOI: .1534/g3.115.018937

PubMed ID: 25589440

Title: The Release 6 reference sequence of the Drosophila melanogaster genome.

PubMed ID: 25589440

Sequence Information:

  • Length: 154
  • Mass: 17124
  • Checksum: 7920DAD1462E179E
  • Sequence:
    • MIMIAISNLE QLILLYWFSL SDISNSFTSL PAIQCSYETA VRGMASLQQM HRSGPHIKTR 
PPRQPLDGKP FAKGVVLKTL IKKPKKPNSA NRKCVLVRLS TGKEMVAYIP GIGHNLQEHN 
IVLCRVGRLQ DVPGVKLKAV RGVYDLAHVV KKSQ

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.