Details for: Vsx2

Gene ID: 31469

Symbol: Vsx2

Ensembl ID: FBgn0263512

Description: Visual system homeobox 2

Associated with

  • Dna-binding transcription factor activity
    (GO:0003700)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Insect visual primordium development
    (GO:0001748)
  • Negative regulation of transcription by rna polymerase ii
    (GO:0000122)
  • Nucleus
    (GO:0005634)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Sequence-specific double-stranded dna binding
    (GO:1990837)

Other Information

Genular Protein ID: 1748497758

Symbol: X2JDS9_DROME

Name: N/A

UniProtKB Accession Codes:

X2JDS9

Database IDs:

AGR 1 ARBA 14 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 DNASU 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 9 Gene3D 1 GeneTree 1 GenomeRNAi 1 HOGENOM 1 InParanoid 1 IntAct 1 InterPro 5 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PROSITE 7 PROSITE-ProRule 1 Pfam 2 Proteomes 2 RefSeq 1 RuleBase 1 SAM 2 SMART 1 SMR 1 STRING 1 SUPFAM 1 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 645
  • Mass: 69288
  • Checksum: 7395C1ED6DE4C634
  • Sequence:
    • MPQRSPFAIQ ELLGLAVAAA TEAPTDLTTT AGATVAKERQ TPTPPKTTNA TMATAATSAA 
TAATPTNAAE GNLTSVSEPQ QQPQQQQQEQ QHHQPHHHQY REHHQMTMAA ASRMAYFNAH 
AAVAAAFMPH QLAAAVHHHH QHQHQHHPHH HPHHPHGAVG GPPPPPPMQH HHPHHPHHPL 
LHAQGFPQLK SFAAGAGTCL PGSLAPKDFG MESLNGFGVG PNSKKKKKKR RHSRTIFTSY 
QLEKLEEAFK EAHYPDVYAR EMLSLKTELP EDRIQVWFQN RRAKWRKTEK VWGGSTIMAE 
YGLYGAMVRH SLPLPDTILK SAKDNDAVAP WLLGMEQKCM HRKSIEAQSA LKDDSGVSDH 
EDSAGSKSAH SEDLSRSRCH ALSSSTESLN VVSPAPSSCP TSASTSAPPT STSGYAGAAS 
SAATTPTGAS TTNSSSSPHI ELGSPSPQQQ QHLQLQQQQQ QQASLYLGAG AVVTGCAPPS 
YHPLLDAANA AGAGAAASSK DFHMIMNTAV AAAAAAAQQQ HQQQQQQQQQ ATATAPGLHA 
HNLAAALMEH DPDAFRNNSI ACLRAKAQEH QARLLNNGGL FLQVRRFAQG QAQIQDPSDM 
LKLSEEHNNN SPIPIPPAHS TVNTQVNVKM ELTANGGSMK NYEEA

Genular Protein ID: 3126957137

Symbol: Q9W4B3_DROME

Name: N/A

UniProtKB Accession Codes:

Q9W4B3 Q4V6W6

Database IDs:

AGR 1 ARBA 14 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 DNASU 1 EMBL 6 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 9 Gene3D 1 GeneTree 1 GenomeRNAi 1 IntAct 1 InterPro 5 KEGG 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PROSITE 7 PROSITE-ProRule 1 PaxDb 1 Pfam 2 Proteomes 2 RefSeq 1 RuleBase 1 SAM 2 SMART 1 SMR 1 SUPFAM 1 UCSC 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

PubMed ID: 26109357

Title: Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

PubMed ID: 26109357

DOI: .1534/g3.115.018929

PubMed ID: 26109356

Title: Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

PubMed ID: 26109356

DOI: .1534/g3.115.018937

PubMed ID: 25589440

Title: The Release 6 reference sequence of the Drosophila melanogaster genome.

PubMed ID: 25589440

Sequence Information:

  • Length: 640
  • Mass: 68668
  • Checksum: 6492F4EB054E85FB
  • Sequence:
    • MPQRSPFAIQ ELLGLAVAAA TEAPTDLTTT AGATVAKERQ TPTPPKTTNA TMATAATSAA 
TAATPTNAAE GNLTSVSEPQ QQPQQQQQEQ QHHQPHHHQY REHHQMTMAA ASRMAYFNAH 
AAVAAAFMPH QLAAAVHHHH QHQHQHHPHH HPHHPHGAVG GPPPPPPMQH HHPHHPHHPL 
LHAQGFPQLK SFAAGAGTCL PGSLAPKDFG MESLNGFGVG PNSKKKKKKR RHSRTIFTSY 
QLEKLEEAFK EAHYPDVYAR EMLSLKTELP EDRIQVWFQN RRAKWRKTEK VWGGSTIMAE 
YGLYGAMVRH SLPLPDTILK SAKDNDAVAP WLLGMHRKSI EAQSALKDDS GVSDHEDSAG 
SKSAHSEDLS RSRCHALSSS TESLNVVSPA PSSCPTSAST SAPPTSTSGY AGAASSAATT 
PTGASTTNSS SSPHIELGSP SPQQQQHLQL QQQQQQQASL YLGAGAVVTG CAPPSYHPLL 
DAANAAGAGA AASSKDFHMI MNTAVAAAAA AAQQQHQQQQ QQQQQATATA PGLHAHNLAA 
ALMEHDPDAF RNNSIACLRA KAQEHQARLL NNGGLFLQVR RFAQGQAQIQ DPSDMLKLSE 
EHNNNSPIPI PPAHSTVNTQ VNVKMELTAN GGSMKNYEEA

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.