Details for: Chpf

Gene ID: 32259

Symbol: Chpf

Ensembl ID: FBgn0263005

Description: Chondroitin polymerizing factor

Associated with

  • Chondroitin sulfate/dermatan sulfate metabolism
    (R-DME-1793185)
  • Chondroitin sulfate biosynthesis
    (R-DME-2022870)
  • Glycosaminoglycan metabolism
    (R-DME-1630316)
  • Metabolism
    (R-DME-1430728)
  • Metabolism of carbohydrates
    (R-DME-71387)
  • Acetylgalactosaminyltransferase activity
    (GO:0008376)
  • Chondroitin sulfate biosynthetic process
    (GO:0030206)
  • Glucuronosyl-n-acetylgalactosaminyl-proteoglycan 4-beta-n-acetylgalactosaminyltransferase activity
    (GO:0047238)
  • Golgi cisterna membrane
    (GO:0032580)
  • N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity
    (GO:0050510)

Other Information

Genular Protein ID: 3241863953

Symbol: Q9VYH2_DROME

Name: N/A

UniProtKB Accession Codes:

Q9VYH2

Database IDs:

AGR 1 ARBA 5 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CAZy 1 CTD 1 EMBL 3 EnsemblMetazoa 2 ExpressionAtlas 1 FlyBase 2 GO 4 Gene3D 1 GeneTree 1 HOGENOM 1 InParanoid 1 IntAct 1 InterPro 2 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PaxDb 1 Pfam 1 Proteomes 2 Reactome 1 RefSeq 2 RuleBase 1 SAM 2 STRING 1 UCSC 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

PubMed ID: 26109357

Title: Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

PubMed ID: 26109357

DOI: .1534/g3.115.018929

PubMed ID: 26109356

Title: Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

PubMed ID: 26109356

DOI: .1534/g3.115.018937

PubMed ID: 25589440

Title: The Release 6 reference sequence of the Drosophila melanogaster genome.

PubMed ID: 25589440

Sequence Information:

  • Length: 819
  • Mass: 93383
  • Checksum: 939E874CF5F52232
  • Sequence:
    • MRRPFTALNR NHYFVIGLLL GLLLSWHIPE DIWEEECPEE AAENLLIERF GQEFEPHLNL 
INKPLAAKKP VKNVIRPRYY SSELGIREKL FIGVMTSQEH INTFATAFNR TTAHLVNKIK 
FFIYADSVKT NYKLKNIVGF TDTRESRRPF HVVKYIADNY LDEYDYFLLV PDTVYVDARK 
LVKLLYHMSI TFDLYMGGAR IGLDPSGGGA SADGQSNEPP ANEEEAPGAS DRNYCSLEAG 
ILLSSSVIRK MRNNLERCVR IGSTSDHSVN IGRCVKYASR VAGCQESFQG MRQFSYALDA 
PGRRHREFSE LAKEEAFRNA STVYPVQTPE DFYRLHAYYS KHHLEKVQER GYALEQKSYR 
IANGSISNKI LEIRWPLGVP PPSAPETRHD ILTWQLLNGT HNFLPNGNAE HAVATLSRIE 
AQDFAKVLEI ALQYAALKHP RLSYHSLHSA YRKFDATRGM DYQLHLNLQE GSGRSRRLVI 
KSFEVVKPLG RVEVVPSPYV TESTRIAMLV PAFEHQVPDA LLFVEQYERI CMQNQDNTFL 
LLIFMYRLES PSKGDEDPFK ALKTLALDLS SKYKTDGSRI AWVSIRLPEQ LSEPVDPQSW 
LLHASMYGPR QLLSLVVADL ALPKLGLESL VLLATPGMVF KADFLNRVRM NTIQGFQVYA 
PIGFQMYPCR WAHFCRECDT CDVSQSSGYF DRHNHDVIAF YSRDYVQARK LLHPQGLPII 
RSDLDIDQLL LQPGEETRPP GVESILDMFV AAQHSVHILR GVEPNLRFGQ DVRNHLARGG 
TLPQSVPERC GREQCIHLAS RKQIGDAIIR YEDKSILHK

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.