Details for: Pph13

Gene ID: 33239

Symbol: Pph13

Ensembl ID: FBgn0023489

Description: PvuII-PstI homology 13

Associated with

  • Compound eye photoreceptor development
    (GO:0042051)
  • Dna-binding transcription activator activity, rna polymerase ii-specific
    (GO:0001228)
  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Nucleus
    (GO:0005634)
  • Ocellus photoreceptor cell development
    (GO:0042463)
  • Photoreceptor cell development
    (GO:0042461)
  • Positive regulation of dna-templated transcription
    (GO:0045893)
  • Positive regulation of transcription by rna polymerase ii
    (GO:0045944)
  • Protein homodimerization activity
    (GO:0042803)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rhabdomere development
    (GO:0042052)
  • Rna polymerase ii transcription regulatory region sequence-specific dna binding
    (GO:0000977)

Other Information

Genular Protein ID: 625751877

Symbol: Q9XZU0_DROME

Name: N/A

UniProtKB Accession Codes:

Q9XZU0

Database IDs:

AGR 1 ARBA 4 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 DNASU 1 EMBL 6 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 12 Gene3D 1 GeneTree 1 HOGENOM 1 InParanoid 1 IntAct 1 InterPro 4 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PROSITE 3 PROSITE-ProRule 1 PaxDb 1 Pfam 1 Proteomes 2 RefSeq 1 RuleBase 1 SAM 1 SMART 1 STRING 1 SUPFAM 1 UCSC 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 10525194

Title: Munster, a novel paired-class homeobox gene specifically expressed in the Drosophila larval eye.

PubMed ID: 10525194

DOI: 10.1016/S0925-4773(99)00168-9

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

PubMed ID: 26109357

Title: Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

PubMed ID: 26109357

DOI: .1534/g3.115.018929

PubMed ID: 26109356

Title: Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

PubMed ID: 26109356

DOI: .1534/g3.115.018937

PubMed ID: 25589440

Title: The Release 6 reference sequence of the Drosophila melanogaster genome.

PubMed ID: 25589440

Sequence Information:

  • Length: 357
  • Mass: 39335
  • Checksum: 812A7A3E0E5B3439
  • Sequence:
    • MDKGTMKRKQ RRYRTTFNTL QLQELERAFQ RTHYPDVFFR EELAVRIDLT EARVQVWFQN 
RRAKWRKQEK IGGLGGDYKE GALDLDVSYD DSAVLGQLDS ALGGGGTLLP DTPPQSSNSL 
DNELKASYGT GAMSPSRLSP NIFLNLNIDH LGLERGGSGL SMEWSTYPPQ TQAQTHPQMD 
SDNQLQQHPP QQHASDPIHA GSSSHHQQQQ QQHQQEQHNP QLHPGLEFAA SLSLDMTDGS 
SAYDEMKFLS VDVDQFTIDS FKADCILSME QSQMQAYGGH SQLVGSSNEL CLDGIGMSSF 
GMEEGEPKSP PSLLVLDKSL PSLSIGVEGI ADLVEQLHHH QHEGGPVGGG VITGDVM

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.