Details for: Trf5

Gene ID: 33454

Symbol: Trf5

Ensembl ID: FBgn0031446

Description: TBP-related factor 5

Associated with

  • Dna-templated transcription initiation
    (GO:0006352)
  • Dna binding
    (GO:0003677)
  • Rna polymerase ii general transcription initiation factor activity
    (GO:0016251)

Other Information

Genular Protein ID: 368356366

Symbol: Q9VQE8_DROME

Name: N/A

UniProtKB Accession Codes:

Q9VQE8

Database IDs:

AGR 1 ARBA 10 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CTD 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 3 Gene3D 1 Genevisible 1 GenomeRNAi 1 HOGENOM 1 InParanoid 1 IntAct 1 InterPro 2 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PaxDb 1 Pfam 1 PhylomeDB 1 Proteomes 2 Reactome 11 RefSeq 1 SAM 1 SMR 1 STRING 1 SUPFAM 1 UCSC 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 305
  • Mass: 35183
  • Checksum: 053D786EF0F47D7D
  • Sequence:
    • MNSARNNLKR SMPMEALIKT KVMKTASMSR KTLLEDAKLS TSDQDPSDRQ VLANKASEGA 
EEMSLPIVNP REPTLKDVLS IYENVSKLGD IQRYLNVIYK PFYCLAMTTS KFHLLELDMG 
LKNTAFEPEK HMALFVYRYS PTRSIRIYPH GNIYCQAFCK NSARYGLANI LKELRYLGYA 
PRLRRLKTNA VNATFSVPFN LNLRQFHLEN PVVTRYDTSK YPFLVYKMMG TTVEIAIFPT 
GYVIVLFATT MEITKLAIAH ILPTLYRLKD PYQEQCKLSH SSGDIDYKLL WENHFQKNGD 
KTTDW

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.