Details for: vir 1

Gene ID: 34652

Symbol: vir 1

Description: virus-induced RNA 1

Associated with

Other Information

Genular Protein ID: 2701745814

Symbol: Q8SXD5_DROME

Name: N/A

UniProtKB Accession Codes:

Q8SXD5

Database IDs:

AGR 1 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 6 EnsemblMetazoa 2 ExpressionAtlas 1 FlyBase 2 GO 1 GenomeRNAi 1 HOGENOM 1 IntAct 1 NCBI Taxonomy 1 OrthoDB 1 PeptideAtlas 1 Proteomes 2 RefSeq 2 SAM 2 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

PubMed ID: 26109357

Title: Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

PubMed ID: 26109357

DOI: .1534/g3.115.018929

PubMed ID: 26109356

Title: Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

PubMed ID: 26109356

DOI: .1534/g3.115.018937

PubMed ID: 25589440

Title: The Release 6 reference sequence of the Drosophila melanogaster genome.

PubMed ID: 25589440

Sequence Information:

  • Length: 234
  • Mass: 25691
  • Checksum: 281BE07C6D68AEC6
  • Sequence:
    • MKLLFGLLMT VLALSGVFTL PARNDPQDDA EVIKVPSRPQ PESDFHNFRG VIDTGSGYPF 
LQPNPSSFNV GIFDSFDDLF RRLRTRLWPV IGRDSGEEGA SPTGDSDDSS DGSGAGFPFG 
VRPLIPLDSK NANTTSTIKV VNGHKVEINE TVYGDSNSVF KVRLVNVRPL ESGEEVAQGV 
HTSGGDFQPA LEPSTSAPPK KFEEFDEEDD DDRREPLEKQ PQDNEVRDID EPKV

Genular Protein ID: 1303351193

Symbol: Q3YBY4_DROME

Name: N/A

UniProtKB Accession Codes:

Q3YBY4

Database IDs:

AGR 1 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 6 EnsemblMetazoa 2 ExpressionAtlas 1 FlyBase 2 GO 1 GenomeRNAi 1 HOGENOM 1 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 Proteomes 2 RefSeq 2 SAM 1 SMR 1 UCSC 1 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16086017

Title: The Jak-STAT signaling pathway is required but not sufficient for the antiviral response of drosophila.

PubMed ID: 16086017

DOI: 10.1038/ni1237

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

PubMed ID: 26109357

Title: Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

PubMed ID: 26109357

DOI: .1534/g3.115.018929

PubMed ID: 26109356

Title: Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

PubMed ID: 26109356

DOI: .1534/g3.115.018937

PubMed ID: 25589440

Title: The Release 6 reference sequence of the Drosophila melanogaster genome.

PubMed ID: 25589440

Sequence Information:

  • Length: 155
  • Mass: 18312
  • Checksum: AA4A8C7A9BE83AA2
  • Sequence:
    • MDQLQQMMEP LREEIRHEED LEQEHEDKEY LERKEKKERE EFDSSDDEDG EATTPVVMSE 
TFNDEWAEFD QDQDREHDRN EDQDHDLDFE NDLNNEIDIE ENFVPIDLSN DIAVNDLAAA 
DPNFPINEDA EFIVHPAVIR TMPMFEKLSL GEPAK

Genular Protein ID: 178228598

Symbol: M9PFQ2_DROME

Name: N/A

UniProtKB Accession Codes:

M9PFQ2

Database IDs:

AGR 1 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 1 GenomeRNAi 1 NCBI Taxonomy 1 OrthoDB 1 PeptideAtlas 1 Proteomes 2 RefSeq 1 SAM 2 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 423
  • Mass: 47645
  • Checksum: 6EF346F023DE9498
  • Sequence:
    • MKLLFGLLMT VLALSGVFTL PARNDPQDDA EVIKVPSRPQ PESDFHNFRG VIDTGSGYPF 
LQPNPSSFNV GIFDSFDDLF RRLRTRLWPV IGRDSGEEGA SPTGDSDDSS DGSGAGFPFG 
VRPLIPLDSK NANTTSTIKV VNGHKVEINE TVYGDSNSVF KVRLVNVRPL ESGEEVAQGV 
HTSGGDFQPA LEPSTSAPPK KFEEFDEEDD DDRREPLEKQ PQDNESTTPT NTSYTTNLHT 
SAPIDSEFEA SDISEDIVET QPEEQKNTMD QLQQMMEPLR EEIRHEEDLE QEHEDKEYLE 
RKEKKEREEF DSSDDEDGEA TTPVVMSETF NDEWAEFDQD QDREHDRNED QDHDLDFEND 
LNNEIDIEEN FVPIDLSNDI AVNDLAAADP NFPINEDAEF IVHPAVIRTM PMFEKLSLGE 
PAK

Genular Protein ID: 1632026417

Symbol: Q0E8R1_DROME

Name: N/A

UniProtKB Accession Codes:

Q0E8R1

Database IDs:

AGR 1 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 6 EnsemblMetazoa 2 ExpressionAtlas 1 FlyBase 2 GO 1 GenomeRNAi 1 HOGENOM 1 InParanoid 1 IntAct 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PaxDb 1 PeptideAtlas 1 Proteomes 2 RefSeq 2 SAM 2 STRING 1 UCSC 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

PubMed ID: 26109357

Title: Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

PubMed ID: 26109357

DOI: .1534/g3.115.018929

PubMed ID: 26109356

Title: Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

PubMed ID: 26109356

DOI: .1534/g3.115.018937

PubMed ID: 25589440

Title: The Release 6 reference sequence of the Drosophila melanogaster genome.

PubMed ID: 25589440

Sequence Information:

  • Length: 431
  • Mass: 48598
  • Checksum: 2B980F7C70E9C6FC
  • Sequence:
    • MKLLFGLLMT VLALSGVFTL PARNDPQDDA EVIKVPSRPQ PESDFHNFRG VIDTGSGYPF 
LQPNPSSFNV GIFDSFDDLF RRLRTRLWPV IGRDSGEEGA SPTGDSDDSS DGSGAGFPFG 
VRPLIPLDSK NANTTSTIKV VNGHKVEINE TVYGDSNSVF KVRLVNVRPL ESGEEVAQGV 
HTSGGDFQPA LEPSTSAPPK KFEEFDEEDD DDRREPLEKQ PQDNEVRDID EPKSTTPTNT 
SYTTNLHTSA PIDSEFEASD ISEDIVETQP EEQKNTMDQL QQMMEPLREE IRHEEDLEQE 
HEDKEYLERK EKKEREEFDS SDDEDGEATT PVVMSETFND EWAEFDQDQD REHDRNEDQD 
HDLDFENDLN NEIDIEENFV PIDLSNDIAV NDLAAADPNF PINEDAEFIV HPAVIRTMPM 
FEKLSLGEPA K

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.