APOD | ENSG00000189058 | NCBI 347

Details for: APOD

Gene ID: 347

Symbol: APOD

Ensembl ID: ENSG00000189058

Description: apolipoprotein D

Associated with

Nr1h2 and nr1h3-mediated signaling
(R-HSA-9024446)
Nr1h3 & nr1h2 regulate gene expression linked to cholesterol transport and efflux
(R-HSA-9029569)
Signaling by nuclear receptors
(R-HSA-9006931)
Signal transduction
(R-HSA-162582)
Slc-mediated transmembrane transport
(R-HSA-425407)
Transport of fatty acids
(R-HSA-804914)
Transport of small molecules
(R-HSA-382551)
Transport of vitamins, nucleosides, and related molecules
(R-HSA-425397)
Angiogenesis
(GO:0001525)
Brain development
(GO:0007420)
Cholesterol binding
(GO:0015485)
Cytoplasm
(GO:0005737)
Cytosolic ribosome
(GO:0022626)
Dendrite
(GO:0030425)
Endoplasmic reticulum
(GO:0005783)
Extracellular exosome
(GO:0070062)
Extracellular region
(GO:0005576)
Extracellular space
(GO:0005615)
Glucose metabolic process
(GO:0006006)
Lipid metabolic process
(GO:0006629)
Lipid transport
(GO:0006869)
Lipid transporter activity
(GO:0005319)
Negative regulation of cytokine production involved in inflammatory response
(GO:1900016)
Negative regulation of focal adhesion assembly
(GO:0051895)
Negative regulation of lipoprotein lipid oxidation
(GO:0060588)
Negative regulation of monocyte chemotactic protein-1 production
(GO:0071638)
Negative regulation of platelet-derived growth factor receptor signaling pathway
(GO:0010642)
Negative regulation of protein import into nucleus
(GO:0042308)
Negative regulation of smooth muscle cell-matrix adhesion
(GO:2000098)
Negative regulation of smooth muscle cell proliferation
(GO:0048662)
Negative regulation of t cell migration
(GO:2000405)
Neuronal cell body
(GO:0043025)
Perinuclear region of cytoplasm
(GO:0048471)
Peripheral nervous system axon regeneration
(GO:0014012)
Protein binding
(GO:0005515)
Response to axon injury
(GO:0048678)
Response to reactive oxygen species
(GO:0000302)
Tissue regeneration
(GO:0042246)

Other Information

Proteins

Apolipoprotein D

Genular Protein ID: 1287761366

Symbol: APOD_HUMAN

Name: Apolipoprotein D

UniProtKB Accession Codes:

P05090 B2R579 D3DNW6 Q6IBG6

Database IDs:

Citations:

PubMed ID: 3453108

Title: Cloning and expression of human apolipoprotein D cDNA.

PubMed ID: 3453108

DOI: 10.1016/s0021-9258(18)66599-8

PubMed ID: 2439269

Title: Human apolipoprotein D gene: gene sequence, chromosome localization, and homology to the alpha 2u-globulin superfamily.

PubMed ID: 2439269

DOI: 10.1089/dna.1987.6.199

PubMed ID: 14702039

Title: Complete sequencing and characterization of 21,243 full-length human cDNAs.

PubMed ID: 14702039

DOI: 10.1038/ng1285

PubMed ID: 15489334

Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

PubMed ID: 15489334

DOI: 10.1101/gr.2596504

PubMed ID: 7918467

Title: Structure of human apolipoprotein D: locations of the intermolecular and intramolecular disulfide links.

PubMed ID: 7918467

DOI: 10.1021/bi00207a011

PubMed ID: 8549691

Title: The human lacrimal gland synthesizes apolipoprotein D mRNA in addition to tear prealbumin mRNA, both species encoding members of the lipocalin superfamily.

PubMed ID: 8549691

DOI: 10.1016/s0014-4835(05)80145-9

PubMed ID: 2244881

Title: Apolipoprotein D is the major protein component in cyst fluid from women with human breast gross cystic disease.

PubMed ID: 2244881

DOI: 10.1042/bj2710803

PubMed ID: 14760718

Title: Screening for N-glycosylated proteins by liquid chromatography mass spectrometry.

PubMed ID: 14760718

DOI: 10.1002/pmic.200300556

PubMed ID: 16335952

Title: Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry.

PubMed ID: 16335952

DOI: 10.1021/pr0502065

PubMed ID: 19159218

Title: Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry.

PubMed ID: 19159218

DOI: 10.1021/pr8008012

PubMed ID: 19139490

Title: A strategy for precise and large scale identification of core fucosylated glycoproteins.

PubMed ID: 19139490

DOI: 10.1074/mcp.m800504-mcp200

PubMed ID: 19838169

Title: Enrichment of glycopeptides for glycan structure and attachment site identification.

PubMed ID: 19838169

DOI: 10.1038/nmeth.1392

PubMed ID: 22171320

Title: Human urinary glycoproteomics; attachment site specific analysis of N- and O-linked glycosylations by CID and ECD.

PubMed ID: 22171320

DOI: 10.1074/mcp.m111.013649

PubMed ID: 24275569

Title: An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome.

PubMed ID: 24275569

DOI: 10.1016/j.jprot.2013.11.014

PubMed ID: 2083249

Title: Is apolipoprotein D a mammalian bilin-binding protein?

PubMed ID: 2083249

PubMed ID: 7613477

Title: Site-specific detection and structural characterization of the glycosylation of human plasma proteins lecithin:cholesterol acyltransferase and apolipoprotein D using HPLC/electrospray mass spectrometry and sequential glycosidase digestion.

PubMed ID: 7613477

DOI: 10.1002/pro.5560040419

PubMed ID: 10391209

Title: Characterization of single-nucleotide polymorphisms in coding regions of human genes.

PubMed ID: 10391209

DOI: 10.1038/10290

Sequence Information:

Length: 189
Mass: 21276
Checksum: 0EAA6DE03D5E71A8
Sequence:

MVMLLLLLSA LAGLFGAAEG QAFHLGKCPN PPVQENFDVN KYLGRWYEIE KIPTTFENGR 
CIQANYSLME NGKIKVLNQE LRADGTVNQI EGEATPVNLT EPAKLEVKFS WFMPSAPYWI 
LATDYENYAL VYSCTCIIQL FHVDFAWILA RNPNLPPETV DSLKNILTSN NIDVKKMTVT 
DQVNCPKLS

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: APOD

Associated with

Other Information

Cloning and expression of human apolipoprotein D cDNA. PubMed ID: 3453108

Human apolipoprotein D gene: gene sequence, chromosome localization, and homology to the alpha 2u-globulin superfamily. PubMed ID: 2439269

Complete sequencing and characterization of 21,243 full-length human cDNAs. PubMed ID: 14702039

The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). PubMed ID: 15489334

Structure of human apolipoprotein D: locations of the intermolecular and intramolecular disulfide links. PubMed ID: 7918467

The human lacrimal gland synthesizes apolipoprotein D mRNA in addition to tear prealbumin mRNA, both species encoding members of the lipocalin superfamily. PubMed ID: 8549691

Apolipoprotein D is the major protein component in cyst fluid from women with human breast gross cystic disease. PubMed ID: 2244881

Screening for N-glycosylated proteins by liquid chromatography mass spectrometry. PubMed ID: 14760718

Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry. PubMed ID: 16335952

Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry. PubMed ID: 19159218

A strategy for precise and large scale identification of core fucosylated glycoproteins. PubMed ID: 19139490

Enrichment of glycopeptides for glycan structure and attachment site identification. PubMed ID: 19838169

Human urinary glycoproteomics; attachment site specific analysis of N- and O-linked glycosylations by CID and ECD. PubMed ID: 22171320

An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome. PubMed ID: 24275569

Is apolipoprotein D a mammalian bilin-binding protein? PubMed ID: 2083249

Site-specific detection and structural characterization of the glycosylation of human plasma proteins lecithin:cholesterol acyltransferase and apolipoprotein D using HPLC/electrospray mass spectrometry and sequential glycosidase digestion. PubMed ID: 7613477

Characterization of single-nucleotide polymorphisms in coding regions of human genes. PubMed ID: 10391209