Details for: Bdp1

Gene ID: 34748

Symbol: Bdp1

Ensembl ID: FBgn0032512

Description: B double prime 1

Associated with

  • Gene expression (transcription)
    (R-DME-74160)
  • Rna polymerase iii transcription
    (R-DME-74158)
  • Rna polymerase iii transcription initiation
    (R-DME-76046)
  • Rna polymerase iii transcription initiation from type 1 promoter
    (R-DME-76061)
  • Rna polymerase iii transcription initiation from type 2 promoter
    (R-DME-76066)
  • Rna polymerase iii preinitiation complex assembly
    (GO:0070898)
  • Rna polymerase iii type 3 promoter sequence-specific dna binding
    (GO:0001006)
  • Tfiiic-class transcription factor complex binding
    (GO:0001156)
  • Transcription factor tfiiib complex
    (GO:0000126)

Other Information

Genular Protein ID: 3378743293

Symbol: Q9VJZ3_DROME

Name: N/A

UniProtKB Accession Codes:

Q9VJZ3

Database IDs:

AGR 1 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 EMBL 4 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 4 GeneTree 1 GenomeRNAi 1 InParanoid 1 IntAct 1 InterPro 3 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PaxDb 1 Pfam 1 Proteomes 2 Reactome 2 RefSeq 1 SAM 1 SMART 2 SMR 1 STRING 1 SUPFAM 1 UCSC 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

PubMed ID: 26109357

Title: Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

PubMed ID: 26109357

DOI: .1534/g3.115.018929

PubMed ID: 26109356

Title: Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

PubMed ID: 26109356

DOI: .1534/g3.115.018937

PubMed ID: 25589440

Title: The Release 6 reference sequence of the Drosophila melanogaster genome.

PubMed ID: 25589440

Sequence Information:

  • Length: 695
  • Mass: 78255
  • Checksum: 9720AF6935AB4F52
  • Sequence:
    • MSMRRQRIKA PANLSLIKRK PRREELPTAK KEDEEEEAVV VEAEAESPPV ASTPAAELEL 
EADAIAFKMP ASSAGQLEEV FHSDLEDNVI QMDLQKTTNG FPMSPSKAQA RQRVRPTPVF 
GQRRNSFVGS PMASDYEGDY QSPATPTRRE RYLSGSSSGT PLQQQVHSPM PPSPYKYLPP 
ASPGMGRIRT ESTCSTYSEG GSKQRKGDDR SQSQIGQRLN ARRDFETRFN KGVPDKSTFK 
MMDMIFYNPE NNPMVPKQSV TTIKDESGGD DSKPAVSQLL EPKGESTSAM LVPQLKLDAN 
GEMIIDEKTL EIETTAEVEA RKVLANSSLI LMDETTGDNG FYKRHKRTPY WTSDETVRFY 
RSLQIIGTDF SLMCQMFPTR SRRDLKLKYK KEERTNGQLI NKALLYPKAF NIQELKDQLE 
EEDREREEND RKWREIARAL PGNPKKRSRV QQQSKASRAL NDGDVVYENE HVTSTKLGKH 
AWAKRRKELE TDENDGSAPA KRKPKAKRRS PKVSVPAATE SLSDVAAIKQ EKTIKTEQTS 
SHLPTGGELQ AELNGLLMDD PVEYDVDVNK PRDKTIINMD DGTLSYVSDV EPAPETPNRK 
AETYLINFIE DQDHELITPD DPIPPSTTEP DIEQILAELA EGSLALVSSL DPEHEDRVLN 
EIYMLDKKTG ELCETPLKIP EHIVQCIMNV MQPED

Genular Protein ID: 498151151

Symbol: X2J875_DROME

Name: N/A

UniProtKB Accession Codes:

X2J875

Database IDs:

AGR 1 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 3 GeneTree 1 GenomeRNAi 1 HOGENOM 1 InterPro 3 KEGG 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 Pfam 1 Proteomes 2 RefSeq 1 SAM 1 SMART 2 SMR 1 SUPFAM 1 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 690
  • Mass: 77628
  • Checksum: AC7DEEB030D62BD8
  • Sequence:
    • MSMRRQRIKA PANLSLIKRK PRREELPTAK KEDEEEEAVV VEAEAESPPV ASTPAAELEL 
EADAIAFKMP ASSAGQLEEV FHSDLEDNVI QMDLQKTTNG FPMSPSKAQA RQRVRPTPVF 
GQRRNSFVGS PMASDYEGDY QSPATPTRRE RYLSGSSSGT PLQQQVHSPM PPSPYKYLPP 
ASPGMGRIRT ESTCSTYSEG GSKQRKGDDR SQSQIGQRLN ARRDFETRFN KGVPDKSTFK 
MMDMIFYNPE NNPMVPKQSV TTIKDESGGD DSKPAVSQLL EPKGESTSAM LVPQLKLDAN 
GEMIIDEKTL EIETTAEVEA RKVLANSSLI LMDETTGDNG FYKRHKRTPY WTSDETVRFY 
RSLQIIGTDF SLMCQMFPTR SRRDLKLKYK KEERTNGQLI NKALLYPKAF NIQELKDQLE 
EEDREREEND RKWREIARAL PGNPKKQQSK ASRALNDGDV VYENEHVTST KLGKHAWAKR 
RKELETDEND GSAPAKRKPK AKRRSPKVSV PAATESLSDV AAIKQEKTIK TEQTSSHLPT 
GGELQAELNG LLMDDPVEYD VDVNKPRDKT IINMDDGTLS YVSDVEPAPE TPNRKAETYL 
INFIEDQDHE LITPDDPIPP STTEPDIEQI LAELAEGSLA LVSSLDPEHE DRVLNEIYML 
DKKTGELCET PLKIPEHIVQ CIMNVMQPED

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.