Details for: ssp3

Gene ID: 35149

Symbol: ssp3

Ensembl ID: FBgn0032723

Description: short spindle 3

Associated with

Other Information

Genular Protein ID: 2779949944

Symbol: Q9VJ35_DROME

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

PubMed ID: 26109357

Title: Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

PubMed ID: 26109357

DOI: .1534/g3.115.018929

PubMed ID: 26109356

Title: Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

PubMed ID: 26109356

DOI: .1534/g3.115.018937

PubMed ID: 25589440

Title: The Release 6 reference sequence of the Drosophila melanogaster genome.

PubMed ID: 25589440

Sequence Information:

  • Length: 1732
  • Mass: 193021
  • Checksum: 2B9463180BB73747
  • Sequence:
  • MEMREVLSRE GREAKNLLVY QFCDETTSSG ATSGFGSTGG DVGGGSGGDG PAVGSGGVLL 
    NGDCYRKPPM VPPKSPNGTP KNCQSPTSPR LKSSASVGCG GGSSGGPRVR SASTGRDKKS 
    ELQARYWALL FGNLQRAINE IYQTVECYEN ISSCQETILV LENYVRDFKA LCEWFKVSWD 
    YESRPLQQRP QSLAWEVRKS NPTPRVRTRS LCSPNNSGKS SPALFPGTQS GETSPFCDNG 
    QISPRKLLRA YDQVPKGAMR LNVRELFAAS KRATQGSSQS DNMEGPLDLS GDKSNFVLRS 
    TQYAQTDLED PHLTLADVRE KMRMEAEERE AQNRIENEAL EEVTIPIDNE DATESLNKQE 
    PSSLELPIHN VADLSKEPEL MEAASEATAL EMTVASLESM ENALLNQQAN KEPTPPSTVI 
    KPLAEILKKP QPLNPLSGNN VQNSPLKYSS VLNRPSKKMI PPPGGVAAQK TISTKPGLVK 
    PNLTTTVNGL RSTKTATAPP AIKTTGRSGL QRHPRPSSKT ECYGPPNNVA SRLSARSRTM 
    LEINGRNTNS SARTLPKKTN PGSILSTATR TKMSSRLSSR EDITSSTSTL KASNEQLSNS 
    RNTLKAENQH SEPKQIQPPT DADDGWLTVK NRRRTSMHWA NRFNQPTGYA SLPTLALLNE 
    QQKEQEHKEK QKGEDDGKVI VKTISAKTKA PIEVAKAKAK TSIVITRPEI KNAKAKVNSF 
    PVQKSNTNQV KKPEKQEKSD TTAPAAIASS SNTRNSSHSI CVGRNSIIKR QKSDLTGLKM 
    TSLHKEYMRS EKNALRKLQQ KEQGNQQHNS SSSSAETVVE SCNEDHSKID IKIQTNCEFS 
    KTIGELYESI AHCKLPSGSL KTNASTLSAC DENEEQNTDD NEEERNERIL GEVQESLERQ 
    IRELEQTEID VDTETDETDC EVQLEEQDDG VDGLEMGSGD DSAVFVTMSD DENASLELRY 
    QALLSDMSWN ERAEALATLQ AYVARHPGRA QELHQKLSSP SRRRSLQETL KKYQAKQARA 
    QQKRNLLQQE KAAKLQQLFS RVEDVKAAKN QIIEDKRQKM QGRLQRAAEN REQYLKQIIE 
    KAHDEEKKLK EINFIKNIEA QNKRLDLLES SKETEGRLQD LEQERQKRVE EKLAKEAAVE 
    RRRQALEKER LLKLEKMNET RLEKEQRIGK MQEQKEKQRQ ALAREKARDR EERLLALQVQ 
    QQQTTEELQR KILQKQMESA RRHEENIEHI RQRALELTIP TRQADEGRGD QDVSEDILNG 
    NATSTTNEDC DLSSSLSEVG GNNAHTRSYK KKMKKLKQRM NQCAAEYLES LEALPAHARR 
    DSTVPKLLNL VVKGGGAQGL DRNLGNLLRV IPKAQTLDFL AFLCMDGLGI LANHVISKGM 
    DENSEISRKS VYLAAQLYRN ACSVCPQIAR HALLGNSITV LFDAINKSFQ LPEEKSPQHP 
    VELSTELMLA CTEALSSSYV KKNTHPKVPE RLPDMINYAV ITGLIEILSR RIQKVRESIE 
    SNKSVMLSLL TTLGFLSRFI DVCQPGPADP TRLLSAAKST ELFGTVSMLY GCVMPMGECI 
    PPRTTALAAS TFHLYVSLAS LDVNTFQETL TVEGPLSLKL LDVMTVILNC SLVNDQWTTN 
    SESCPMLIDL VASMAFFCVN NRRHQDLLIS EQYAVIFKRM AKLPTQFNPV IYPFLVTVSF 
    NNPPAREFLS KDFDLTFLDE YSKSEMAQRN VVIKLINSRT KDKISAGNKK NA

Genular Protein ID: 2880026489

Symbol: X2J6U8_DROME

Name: N/A

UniProtKB Accession Codes:

Database IDs:

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 1730
  • Mass: 192803
  • Checksum: 250A17393DCA408D
  • Sequence:
  • MEMREVLSRE GREAKNLLVY QFCDETTSSG ATSGFGSTGG DVGGGSGGDG PAVGSGGVLL 
    NGYRKPPMVP PKSPNGTPKN CQSPTSPRLK SSASVGCGGG SSGGPRVRSA STGRDKKSEL 
    QARYWALLFG NLQRAINEIY QTVECYENIS SCQETILVLE NYVRDFKALC EWFKVSWDYE 
    SRPLQQRPQS LAWEVRKSNP TPRVRTRSLC SPNNSGKSSP ALFPGTQSGE TSPFCDNGQI 
    SPRKLLRAYD QVPKGAMRLN VRELFAASKR ATQGSSQSDN MEGPLDLSGD KSNFVLRSTQ 
    YAQTDLEDPH LTLADVREKM RMEAEEREAQ NRIENEALEE VTIPIDNEDA TESLNKQEPS 
    SLELPIHNVA DLSKEPELME AASEATALEM TVASLESMEN ALLNQQANKE PTPPSTVIKP 
    LAEILKKPQP LNPLSGNNVQ NSPLKYSSVL NRPSKKMIPP PGGVAAQKTI STKPGLVKPN 
    LTTTVNGLRS TKTATAPPAI KTTGRSGLQR HPRPSSKTEC YGPPNNVASR LSARSRTMLE 
    INGRNTNSSA RTLPKKTNPG SILSTATRTK MSSRLSSRED ITSSTSTLKA SNEQLSNSRN 
    TLKAENQHSE PKQIQPPTDA DDGWLTVKNR RRTSMHWANR FNQPTGYASL PTLALLNEQQ 
    KEQEHKEKQK GEDDGKVIVK TISAKTKAPI EVAKAKAKTS IVITRPEIKN AKAKVNSFPV 
    QKSNTNQVKK PEKQEKSDTT APAAIASSSN TRNSSHSICV GRNSIIKRQK SDLTGLKMTS 
    LHKEYMRSEK NALRKLQQKE QGNQQHNSSS SSAETVVESC NEDHSKIDIK IQTNCEFSKT 
    IGELYESIAH CKLPSGSLKT NASTLSACDE NEEQNTDDNE EERNERILGE VQESLERQIR 
    ELEQTEIDVD TETDETDCEV QLEEQDDGVD GLEMGSGDDS AVFVTMSDDE NASLELRYQA 
    LLSDMSWNER AEALATLQAY VARHPGRAQE LHQKLSSPSR RRSLQETLKK YQAKQARAQQ 
    KRNLLQQEKA AKLQQLFSRV EDVKAAKNQI IEDKRQKMQG RLQRAAENRE QYLKQIIEKA 
    HDEEKKLKEI NFIKNIEAQN KRLDLLESSK ETEGRLQDLE QERQKRVEEK LAKEAAVERR 
    RQALEKERLL KLEKMNETRL EKEQRIGKMQ EQKEKQRQAL AREKARDREE RLLALQVQQQ 
    QTTEELQRKI LQKQMESARR HEENIEHIRQ RALELTIPTR QADEGRGDQD VSEDILNGNA 
    TSTTNEDCDL SSSLSEVGGN NAHTRSYKKK MKKLKQRMNQ CAAEYLESLE ALPAHARRDS 
    TVPKLLNLVV KGGGAQGLDR NLGNLLRVIP KAQTLDFLAF LCMDGLGILA NHVISKGMDE 
    NSEISRKSVY LAAQLYRNAC SVCPQIARHA LLGNSITVLF DAINKSFQLP EEKSPQHPVE 
    LSTELMLACT EALSSSYVKK NTHPKVPERL PDMINYAVIT GLIEILSRRI QKVRESIESN 
    KSVMLSLLTT LGFLSRFIDV CQPGPADPTR LLSAAKSTEL FGTVSMLYGC VMPMGECIPP 
    RTTALAASTF HLYVSLASLD VNTFQETLTV EGPLSLKLLD VMTVILNCSL VNDQWTTNSE 
    SCPMLIDLVA SMAFFCVNNR RHQDLLISEQ YAVIFKRMAK LPTQFNPVIY PFLVTVSFNN 
    PPAREFLSKD FDLTFLDEYS KSEMAQRNVV IKLINSRTKD KISAGNKKNA

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.