Details for: Hsepi

Gene ID: 35569

Symbol: Hsepi

Ensembl ID: FBgn0033087

Description: Heparan sulfate C5-epimerase

Associated with

  • Golgi apparatus
    (GO:0005794)
  • Heparan sulfate proteoglycan biosynthetic process
    (GO:0015012)
  • Heparosan-n-sulfate-glucuronate 5-epimerase activity
    (GO:0047464)

Other Information

Genular Protein ID: 1371022106

Symbol: A1Z6M8_DROME

Name: N/A

UniProtKB Accession Codes:

A1Z6M8

Database IDs:

AGR 1 ARBA 4 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CTD 1 ChEBI 2 DNASU 1 EC 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 5 GeneTree 1 Genevisible 1 GenomeRNAi 1 InParanoid 1 IntAct 1 InterPro 2 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PaxDb 1 Pfam 3 PhylomeDB 1 Proteomes 2 RefSeq 1 Rhea 3 SAM 2 SMR 1 STRING 1 UCSC 1 UniPathway 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 614
  • Mass: 69332
  • Checksum: 808DCCF6AD37773A
  • Sequence:
    • MSKYLSSQRD ALSAPALPVS RENREPPKFQ GVKQREPLVF FIMRLNLKAV LLVLTVAVVV 
ITLGVYMRCA AFSFSPDFVR PLDRSARQSS SGGEATALHD IECSINQEYT VHCKRDENAN 
EVYVPFSFLR NYFDVSGAVS TNSNEVAKFN WVHSTAKVNL PRGKYDARGV YMYFENYNVE 
VRDRVKCISA AEGVPVSTQW EKRGYFYPTQ IAQFALSHYS KNLTEPAPRV RVLEDGDGNQ 
MEWSTPKTSN MTRIWHHKFN TSVVQFETAP GYEGVISIAL NQTLDLLLSV DLLLVTNSSS 
LMITVQNRDT RHNYSLHYIP ADLLLSVQDT NIYYGLGGSA LNKWRHITRD LHIDLQKGIM 
GDKRSPLKIR RSDLEVISIG FLGLGFFDNI TLSTSDHLAH FYDAAEWFVH NQDPKTGGWT 
NPVRRSLNGF AELRPGWISA MGQGHAISVL ARAYWHSGGD ERYLRAAAAG LQPYRVYSRD 
GGVLAQFMDK FYWYEEYPTT PPSYVLNGFI YSLLGLYDLN STAPGKIARE AGKLFAQGMH 
SLKKMLLLFD TGSGTSYDLR HLSLGVAPNL ARWDYHATHV NQLLLLATID SDPLIAQTAE 
RWKGYMFGRR AKHN

Genular Protein ID: 1392851334

Symbol: C3KGM6_DROME

Name: N/A

UniProtKB Accession Codes:

C3KGM6

Database IDs:

AGR 1 ARBA 4 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CTD 1 ChEBI 2 DNASU 1 EC 1 EMBL 4 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 5 GeneTree 1 GenomeRNAi 1 HOGENOM 1 InterPro 2 KEGG 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 Pfam 3 Proteomes 2 RefSeq 1 Rhea 3 SAM 1 SMR 1 UniPathway 1 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

PubMed ID: 26109357

Title: Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

PubMed ID: 26109357

DOI: .1534/g3.115.018929

PubMed ID: 26109356

Title: Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

PubMed ID: 26109356

DOI: .1534/g3.115.018937

PubMed ID: 25589440

Title: The Release 6 reference sequence of the Drosophila melanogaster genome.

PubMed ID: 25589440

Sequence Information:

  • Length: 612
  • Mass: 69104
  • Checksum: 1F85D13DC404D4D7
  • Sequence:
    • MSKYLSSQRD ALSAPALPVS RENREPPKFQ GQREPLVFFI MRLNLKAVLL VLTVAVVVIT 
LGVYMRCAAF SFSPDFVRPL DRSARQSSSG GEATALHDIE CSINQEYTVH CKRDENANEV 
YVPFSFLRNY FDVSGAVSTN SNEVAKFNWV HSTAKVNLPR GKYDARGVYM YFENYNVEVR 
DRVKCISAAE GVPVSTQWEK RGYFYPTQIA QFALSHYSKN LTEPAPRVRV LEDGDGNQME 
WSTPKTSNMT RIWHHKFNTS VVQFETAPGY EGVISIALNQ TLDLLLSVDL LLVTNSSSLM 
ITVQNRDTRH NYSLHYIPAD LLLSVQDTNI YYGLGGSALN KWRHITRDLH IDLQKGIMGD 
KRSPLKIRRS DLEVISIGFL GLGFFDNITL STSDHLAHFY DAAEWFVHNQ DPKTGGWTNP 
VRRSLNGFAE LRPGWISAMG QGHAISVLAR AYWHSGGDER YLRAAAAGLQ PYRVYSRDGG 
VLAQFMDKFY WYEEYPTTPP SYVLNGFIYS LLGLYDLNST APGKIAREAG KLFAQGMHSL 
KKMLLLFDTG SGTSYDLRHL SLGVAPNLAR WDYHATHVNQ LLLLATIDSD PLIAQTAERW 
KGYMFGRRAK HN

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.