Details for: Sema1b

Gene ID: 37007

Symbol: Sema1b

Ensembl ID: FBgn0016059

Description: Semaphorin 1b

Associated with

Other Information

Genular Protein ID: 2000771985

Symbol: Q7KK54_DROME

Name: N/A

UniProtKB Accession Codes:

Q7KK54

Database IDs:

AGR 1 ARBA 1 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 10 EnsemblMetazoa 3 ExpressionAtlas 1 FlyBase 2 GO 10 Gene3D 2 GenomeRNAi 1 HOGENOM 1 InParanoid 1 IntAct 1 InterPro 5 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PDB 6 PDBsum 3 PROSITE 2 PROSITE-ProRule 1 PaxDb 1 PeptideAtlas 1 Pfam 1 Proteomes 2 Reactome 5 RefSeq 3 SAM 2 SMART 1 SMR 1 STRING 1 SUPFAM 2 UCSC 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

PubMed ID: 26109357

Title: Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

PubMed ID: 26109357

DOI: .1534/g3.115.018929

PubMed ID: 26109356

Title: Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

PubMed ID: 26109356

DOI: .1534/g3.115.018937

PubMed ID: 25589440

Title: The Release 6 reference sequence of the Drosophila melanogaster genome.

PubMed ID: 25589440

PubMed ID: 31417095

Title: Diversity of oligomerization in Drosophila semaphorins suggests a mechanism of functional fine-tuning.

PubMed ID: 31417095

DOI: 10.1038/s41467-019-11683-y

PubMed ID: 32500924

Title: Structural basis of semaphorin-plexin cis interaction.

PubMed ID: 32500924

DOI: 10.15252/embj.2019102926

Sequence Information:

  • Length: 770
  • Mass: 85198
  • Checksum: 9F58BE352CDB6A13
  • Sequence:
    • MSSKSRPSSA AMLVNAIPMI LLITLSGLTI VAGWMPDVKP DLQTKQDKVL AHFIGNSTDY 
FKILDHNDEF VLVGAKDVIY NVSLNGLKEI ARLEWHSTDA DRELCALKGK HEWDCHNYLR 
VYALRPNGEV LLCGTNSYKP RCRHYTPVEV SSEEAGSAGH AHAMRYEVSR DVEAQGLCPY 
SPAHNSTYAF ADGHLYSATV ADFSGGDPLI YRENLRTEQY DLKQLNQPDF VGAIERNGYV 
LFFFRELSME VMNFGKAVYS RVARVCKNDR GGPYSHGKSW TSFLKARLNC SVPGEFPFYF 
DEIQAISPIV ESGSKSLIYA VFTTSVNAIP GSAVCAFNVD DILAAFDGEF KSQKDSQSHW 
LPVEREQVPK PRPGQCVEDS RTLTSIAVNF IKNHPLMEEA VPAVHGRPLL TKVNLHHRLT 
AIAVHPQVKS LSGAYYDVIY SGTDDGKVTK FINILSTHPN STVDRLKTVV ISEMQVLPLG 
TPIRELVIST SKNSLVVVSD GSLVSVPLHH CSHIVDCLGC LSLQDPICAW DLQTHECKNL 
ATSQHKFGTK TYLQSLNSTK KAAALLCPHI PRDAPGAETV SFVTMAPPPT EEQKLLYSNV 
GSSQGNQPSL EQQPTGGDDF GLNKITLTSM DPDDIMPNLN DPQKSTASVD EIKYASTPSF 
MLLTTIVFFT FLVGGIAGIC CVKAKSRLME AQMDESHRNH FGKPMQFKHQ NTGKDINLLM 
GSNAYTTTQK TPNLDLEKDR SHECKNSTEH LEKELPCKTS TLTKVKRTYI

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.