Details for: otp

Gene ID: 37364

Symbol: otp

Ensembl ID: FBgn0015524

Description: orthopedia

Associated with

  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Neuron differentiation
    (GO:0030182)
  • Regulation of dna-templated transcription
    (GO:0006355)

Other Information

Genular Protein ID: 2690878739

Symbol: OTP_DROME

Name: Homeobox protein orthopedia

UniProtKB Accession Codes:

P56672 A4IJ64 Q3KN52 Q7KVQ3 Q9W2Q4

Database IDs:

AGR 1 AlphaFoldDB 1 Bgee 1 BioGRID 1 BioGRID-ORCS 1 CDD 1 CTD 1 ChiTaRS 1 DIP 1 DNASU 1 EMBL 4 EnsemblMetazoa 2 ExpressionAtlas 1 FlyBase 1 GO 4 Gene3D 1 GeneTree 1 GenomeRNAi 1 InParanoid 1 IntAct 1 InterPro 6 KEGG 1 NCBI Taxonomy 1 PANTHER 2 PRINTS 1 PRO 1 PROSITE 3 PaxDb 1 Pfam 1 PhylomeDB 1 Proteomes 1 RefSeq 2 SMART 1 SMR 1 STRING 1 SUPFAM 1 UCSC 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 7913821

Title: Orthopedia, a novel homeobox-containing gene expressed in the developing CNS of both mouse and Drosophila.

PubMed ID: 7913821

DOI: 10.1016/0896-6273(94)90461-8

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

Sequence Information:

  • Length: 409
  • Mass: 43173
  • Checksum: E186EFAC8C125BE9
  • Sequence:
    • MLNNLGANVL GPKDCDLPKA ALTALHAGVN SFGQLPVGPN LADLGGGAGG GGSSGGVPVG 
GGVARLHISG GLCDNSNALN GGNGSSGNGN GNNNNGNGNN NNSMQQQDQK RHRTRFTPAQ 
LNELERCFSK THYPDIFMRE EIAMRIGLTE SRVQVWFQNR RAKWKKRKKT TNVFRTPGAL 
LPSHGLPPFG ANITNIAMGD GLCGTGMFGG DRWSVGVNPM TAGFGQLNQS SPLSSSLNSG 
LNSGINMGSA LGAGSYQHYG LNALGDSMMY QHSVGGVSCG PSGSPSATTP PNMNSCSSVT 
PPPLSAQPNS SQNELNGEPM PLHQQQQQQT HQHQQQQTHQ HHPMAPPTPT QQQQQLPQSM 
QSPSDGANDT LHSIAALRRR ASELNAIPSY LQMAPHNYEH YNSNSNSVY

Genular Protein ID: 2243649848

Symbol: A0A0B4LFU7_DROME

Name: N/A

UniProtKB Accession Codes:

A0A0B4LFU7

Database IDs:

AGR 1 ARBA 3 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 3 Gene3D 1 GeneTree 1 InterPro 6 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PRINTS 1 PROSITE 5 PROSITE-ProRule 1 Pfam 1 Proteomes 2 RefSeq 1 RuleBase 1 SAM 1 SMART 1 SMR 1 SUPFAM 1 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 306
  • Mass: 33601
  • Checksum: A1145292EE64AE6B
  • Sequence:
    • MQQQDQKRHR TRFTPAQLNE LERCFSKTHY PDIFMREEIA MRIGLTESRV QVWFQNRRAK 
WKKRKKTTNV FRTPGALLPS HGLPPFGANI TNIAMGDGLC GTGMFGGDRW SVGVNPMTAG 
FGQLNQSSPL SSSLNSGLNS GINMGSALGA GSYQHYGLNA LGDSMMYQHS VGGVSCGPSG 
SPSATTPPNM NSCSSVTPPP LSAQPNSSQN ELNGEPMPLH QQQQQQTHQH QQQQTHQHHP 
MAPPTPTQQQ QQLPQSMQSP SDGANDTLHS IAALRRRASE LNAIPSYLQM APHNYEHYNS 
NSNSVY

Genular Protein ID: 1581507048

Symbol: A0A0B4LG13_DROME

Name: N/A

UniProtKB Accession Codes:

A0A0B4LG13

Database IDs:

AGR 1 ARBA 3 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 3 Gene3D 1 GeneTree 1 InterPro 6 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PRINTS 1 PROSITE 5 PROSITE-ProRule 1 Pfam 1 Proteomes 2 RefSeq 1 RuleBase 1 SAM 1 SMART 1 SMR 1 SUPFAM 1 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 367
  • Mass: 39020
  • Checksum: 4F33118964E372B2
  • Sequence:
    • MLNNLGANVL GPKDCDLPKA ALTALHAGVN SFGQLPVGPN LADLGGGAGG GGSSGGVPVG 
GGVARLHISG GLCDNSNALN GGNGSSGNGN GNNNNGNGNN NNSMQQQDQK RHRTRFTPAQ 
LNELERCFSK THYPDIFMRE EIAMRIGLTE SRVQVWFQNR RAKWKKRKKT TNVFRTPGAL 
LPSHGLPPFG ANITNIAMGD GLCGTGMFGG DRWSVGVNPM TAGDSMMYQH SVGGVSCGPS 
GSPSATTPPN MNSCSSVTPP PLSAQPNSSQ NELNGEPMPL HQQQQQQTHQ HQQQQTHQHH 
PMAPPTPTQQ QQQLPQSMQS PSDGANDTLH SIAALRRRAS ELNAIPSYLQ MAPHNYEHYN 
SNSNSVY

Genular Protein ID: 449645653

Symbol: A0A0B4LFZ2_DROME

Name: N/A

UniProtKB Accession Codes:

A0A0B4LFZ2

Database IDs:

AGR 1 ARBA 3 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 3 Gene3D 1 GeneTree 1 InterPro 6 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PRINTS 1 PROSITE 5 PROSITE-ProRule 1 Pfam 1 Proteomes 2 RefSeq 1 RuleBase 1 SAM 1 SMART 1 SMR 1 SUPFAM 1 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 313
  • Mass: 34465
  • Checksum: C02BF67B34EE95C9
  • Sequence:
    • MQQQDQHLDK NKQKRHRTRF TPAQLNELER CFSKTHYPDI FMREEIAMRI GLTESRVQVW 
FQNRRAKWKK RKKTTNVFRT PGALLPSHGL PPFGANITNI AMGDGLCGTG MFGGDRWSVG 
VNPMTAGFGQ LNQSSPLSSS LNSGLNSGIN MGSALGAGSY QHYGLNALGD SMMYQHSVGG 
VSCGPSGSPS ATTPPNMNSC SSVTPPPLSA QPNSSQNELN GEPMPLHQQQ QQQTHQHQQQ 
QTHQHHPMAP PTPTQQQQQL PQSMQSPSDG ANDTLHSIAA LRRRASELNA IPSYLQMAPH 
NYEHYNSNSN SVY

Genular Protein ID: 1966003955

Symbol: A0A0B4LG58_DROME

Name: N/A

UniProtKB Accession Codes:

A0A0B4LG58

Database IDs:

AGR 1 ARBA 3 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 3 Gene3D 1 GeneTree 1 InterPro 6 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PRINTS 1 PROSITE 5 PROSITE-ProRule 1 Pfam 1 Proteomes 2 RefSeq 1 RuleBase 1 SAM 1 SMART 1 SMR 1 SUPFAM 1 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 374
  • Mass: 39884
  • Checksum: C1F60FDFA018ABE2
  • Sequence:
    • MLNNLGANVL GPKDCDLPKA ALTALHAGVN SFGQLPVGPN LADLGGGAGG GGSSGGVPVG 
GGVARLHISG GLCDNSNALN GGNGSSGNGN GNNNNGNGNN NNSMQQQDQH LDKNKQKRHR 
TRFTPAQLNE LERCFSKTHY PDIFMREEIA MRIGLTESRV QVWFQNRRAK WKKRKKTTNV 
FRTPGALLPS HGLPPFGANI TNIAMGDGLC GTGMFGGDRW SVGVNPMTAG DSMMYQHSVG 
GVSCGPSGSP SATTPPNMNS CSSVTPPPLS AQPNSSQNEL NGEPMPLHQQ QQQQTHQHQQ 
QQTHQHHPMA PPTPTQQQQQ LPQSMQSPSD GANDTLHSIA ALRRRASELN AIPSYLQMAP 
HNYEHYNSNS NSVY

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.