Xpd | FBgn0261850 | NCBI 37414

Details for: Xpd

Gene ID: 37414

Symbol: Xpd

Ensembl ID: FBgn0261850

Description: Xeroderma pigmentosum D

Associated with

Dna repair
(R-DME-73894)
Dual incision in gg-ner
(R-DME-5696400)
Dual incision in tc-ner
(R-DME-6782135)
Formation of incision complex in gg-ner
(R-DME-5696395)
Formation of rna pol ii elongation complex
(R-DME-112382)
Formation of tc-ner pre-incision complex
(R-DME-6781823)
Formation of the early elongation complex
(R-DME-113418)
Gap-filling dna repair synthesis and ligation in tc-ner
(R-DME-6782210)
Gene expression (transcription)
(R-DME-74160)
Generic transcription pathway
(R-DME-212436)
Global genome nucleotide excision repair (gg-ner)
(R-DME-5696399)
Metabolism of rna
(R-DME-8953854)
Mrna capping
(R-DME-72086)
Nucleotide excision repair
(R-DME-5696398)
Rna pol ii ctd phosphorylation and interaction with ce
(R-DME-77075)
Rna polymerase ii pre-transcription events
(R-DME-674695)
Rna polymerase ii promoter escape
(R-DME-73776)
Rna polymerase ii transcription
(R-DME-73857)
Rna polymerase ii transcription elongation
(R-DME-75955)
Rna polymerase ii transcription initiation
(R-DME-75953)
Rna polymerase ii transcription initiation and promoter clearance
(R-DME-76042)
Rna polymerase ii transcription pre-initiation and promoter opening
(R-DME-73779)
Rna polymerase i promoter clearance
(R-DME-73854)
Rna polymerase i promoter escape
(R-DME-73772)
Rna polymerase i transcription
(R-DME-73864)
Tp53 regulates transcription of dna repair genes
(R-DME-6796648)
Transcription-coupled nucleotide excision repair (tc-ner)
(R-DME-6781827)
Transcriptional regulation by tp53
(R-DME-3700989)
5'-3' dna helicase activity
(GO:0043139)
Atp binding
(GO:0005524)
Cytoplasm
(GO:0005737)
Damaged dna binding
(GO:0003684)
Dna binding
(GO:0003677)
Dna damage response
(GO:0006974)
Dna helicase activity
(GO:0003678)
Helicase activity
(GO:0004386)
Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
(GO:0016818)
Negative regulation of g2/m transition of mitotic cell cycle
(GO:0010972)
Nucleic acid binding
(GO:0003676)
Nucleobase-containing compound metabolic process
(GO:0006139)
Nucleotide-excision repair
(GO:0006289)
Nucleus
(GO:0005634)
Polytene chromosome
(GO:0005700)
Polytene chromosome interband
(GO:0005705)
Polytene chromosome puff
(GO:0005703)
Positive regulation of mitotic recombination
(GO:0045951)
Regulation of chromosome segregation
(GO:0051983)
Regulation of mitotic nuclear division
(GO:0007088)
Regulation of syncytial blastoderm mitotic cell cycle
(GO:0007348)
Response to uv
(GO:0009411)
Rna polymerase ii promoter clearance
(GO:0001111)
Transcription by rna polymerase ii
(GO:0006366)
Transcription factor tfiih core complex
(GO:0000439)
Transcription factor tfiih holo complex
(GO:0005675)
Transcription initiation at rna polymerase ii promoter
(GO:0006367)
Transcription open complex formation at rna polymerase ii promoter
(GO:0001113)

Other Information

Proteins

Q7KVP9_DROME

Genular Protein ID: 1986770022

Symbol: Q7KVP9_DROME

Name: N/A

UniProtKB Accession Codes:

Q7KVP9

Database IDs:

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

Length: 769
Mass: 88011
Checksum: CA6BE91A2D5618E4
Sequence:

MKLSVDGLLV YFPYEYIYPE QYAYMLELKR SLDAKGHCLL EMPSGTGKTA TLLSLIVAYM 
VEHPETVRKL IYCSRTVPEI EKVIAELQNL MVYYERHCPN PPPFTGLVLS SRKNMCIHPE 
VSKEREGKAV DGKCYGLTAS YIRERHEMDT ETPICQYFEG FSLEGKESTL PVGVYSIDDL 
KEYGRSRNWC PYFLARYAIA HAHIVVYSYH YLLDPKIAQV VSKEMSRESC VVFDEAHNID 
NVCIDSMSVK INRRTVERST NALNHLTKLV QDIREEDTNR LNEEYQRMVQ GLKDASVQRD 
TDMILANPVL PNDVLTEVVP GNIRNADHFL SFLRRFIEYI KTRLRVHHVV QESPAGFLKD 
ISSKICIERK PLRFCAERLS SLLRTLEISD LTEYGALTLI THFATLVSTY TKGFTIIIEP 
FDDKTPTVSN PILHFSCLDS SIAMAPVFSR FQTVVITSGT LSPMDMYPKI LDFDPVVMSS 
FTMTLARPCL LPMIVSKGND QVTISSKFET REDTAVIRNY GQLLVEVAKT VPDGIVCFFT 
SYLYLESVVA SWYDQGIVDT LLRYKLLFIE TQDNAETSYA LMNYVKACDC GRGAVLLAVA 
RGKVSEGVDF DHHYGRAVLM FGIPYVYTQS RILKARLDYL RDQFQIREND FLTFDAMRHA 
AQCVGRALRG KTDYGIMIFA DKRFSRHDKR SRLPKWIQEH LVDSFCNLST EEAVQLARRW 
LRRMAQPFTR EDQLGISLLT LAQLENMEQE KLERQAQGKQ GVGGEVQEL

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: Xpd

Associated with

Other Information

The genome sequence of Drosophila melanogaster. PubMed ID: 10731132

Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence. PubMed ID: 12537568

Annotation of the Drosophila melanogaster euchromatic genome: a systematic review. PubMed ID: 12537572

The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective. PubMed ID: 12537573

Heterochromatic sequences in a Drosophila whole-genome shotgun assembly. PubMed ID: 12537574

Combined evidence annotation of transposable elements in genome sequences. PubMed ID: 16110336

The Release 5.1 annotation of Drosophila melanogaster heterochromatin. PubMed ID: 17569856

Sequence finishing and mapping of Drosophila melanogaster heterochromatin. PubMed ID: 17569867