Details for: Sdc

Gene ID: 37447

Symbol: Sdc

Ensembl ID: FBgn0010415

Description: Syndecan

Associated with

Other Information

Genular Protein ID: 2266761935

Symbol: SDC_DROME

Name: Syndecan

UniProtKB Accession Codes:

P49415 Q0E8Z8 Q8SXJ0 Q9W2G7

Database IDs:

AGR 1 AlphaFoldDB 1 Bgee 1 BioGRID 1 BioGRID-ORCS 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 5 EnsemblMetazoa 2 ExpressionAtlas 1 FlyBase 1 GO 13 GeneTree 1 Genevisible 1 GenomeRNAi 1 GlyCosmos 1 GlyGen 1 InParanoid 1 IntAct 1 InterPro 4 KEGG 1 NCBI Taxonomy 1 PANTHER 2 PIR 1 PRO 1 PROSITE 1 Pfam 1 PhylomeDB 1 Proteomes 1 Reactome 7 RefSeq 2 SAM 1 SMART 1 STRING 1 UCSC 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 8159748

Title: Drosophila syndecan: conservation of a cell-surface heparan sulfate proteoglycan.

PubMed ID: 8159748

DOI: 10.1073/pnas.91.8.3334

PubMed ID: 14761655

Title: Heparan sulfate proteoglycan syndecan promotes axonal and myotube guidance by slit/robo signaling.

PubMed ID: 14761655

DOI: 10.1016/j.cub.2004.01.006

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537569

Title: A Drosophila full-length cDNA resource.

PubMed ID: 12537569

DOI: 10.1186/gb-2002-3-12-research0080

Sequence Information:

  • Length: 399
  • Mass: 42088
  • Checksum: FCBC6EA17C5DADBD
  • Sequence:
    • MKPKQKISVE PLLLVAILIG VLVAATHAQD QKSVKPSAAA PSAAASRPHD EIYIDDDSIE 
GSGGRGGIHE DLEKDPDYSG SGFGPDDEDA EPDQHSHSSH NTRISQSSNS GINTAHTPTQ 
TSSTIPTTST STPMPTTTPT ATTPASTTTA AATQISSFAN SSSTTTTTLA PTIPAEPQQP 
LFPPFDKDLD TESSGDGIDA DAEDDDEDDG DDKDYDYNKE LDKEIDIDGP EPGHLPPVVH 
HNTVETGHIP TTDEIDVDGG DEDDNGDSDI DGPRIGGNDG DITERGPGAG GSNVHELDPN 
TNVNSQPSDT KGIDHRPNGN EVVIMSEDDR TSSFFSQPGI LAAVIGGAVV GLLCAILVVM 
FIVYRMRKKD EGSYALDEPK RSPANNSYAK NANNREFYA

Genular Protein ID: 1670576468

Symbol: B7YZN0_DROME

Name: N/A

UniProtKB Accession Codes:

B7YZN0

Database IDs:

AGR 1 ARBA 8 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 1 GeneTree 1 Genevisible 1 GenomeRNAi 1 InterPro 4 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PROSITE 1 PeptideAtlas 1 Pfam 1 Proteomes 2 RefSeq 1 RuleBase 1 SAM 3 SMART 2 SMR 1 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 494
  • Mass: 52186
  • Checksum: 5D27120AE7C474E0
  • Sequence:
    • MKPKQKISVE PLLLVAILIG VLVAATHAQD QKSVKPSAAA PSAAASRPHD EIYIDDDSIE 
GSGGRGGIHE DLEKDPDYSG SGFGPDDEDA EPDQHSHSSH NTRISQSSNS GINSKHNSNE 
NYGKNSKNSN SDLISSRFNN NNNHNQIDNS QNINLNPNNN HQTNSGTIIG SSTTANNNNN 
HNININSQNG IISGSGSDIG GHSTGINSIA HTPTQTSSTI PTTSTSTPMP TTTPTATTPA 
STTTAAATQI SSFANSSSTT TTTLAPTIPA EPQQPLFPPF DKDLDTESSG DGIDADAEDD 
DEDDGDDKDY DYNKELDKEI DIDGPEPGHL PPVVHHNTVE TGHIPTTDEI DVDGGDEDDN 
GDSDIDGPRI GGNDGDITER GPGAGGSNVH ELDPNTNVNS QPSDTKGIDH RPNGNEVVIM 
SEDDRTSSFF SQPGILAAVI GGAVVGLLCA ILVVMFIVYR MRKKDEGSYA LDEPKRSPAN 
NSYAKNANNR EFYA

Genular Protein ID: 2902550884

Symbol: A0A0B4LG79_DROME

Name: N/A

UniProtKB Accession Codes:

A0A0B4LG79

Database IDs:

AGR 1 ARBA 8 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 1 GeneTree 1 GenomeRNAi 1 InterPro 4 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PROSITE 1 PeptideAtlas 1 Pfam 1 Proteomes 2 RefSeq 1 RuleBase 1 SAM 2 SMART 2 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 266
  • Mass: 28238
  • Checksum: 16A5B7DB9BE8F004
  • Sequence:
    • MPTTTPTATT PASTTTAAAT QISSFANSSS TTTTTLAPTI PAEPQQPLFP PFDKDLDTES 
SGDGIDADAE DDDEDDGDDK DYDYNKELDK EIDIDGPEPG HLPPVVHHNT VETGHIPTTD 
EIDVDGGDED DNGDSDIDGP RIGGNDGDIT ERGPGAGGSN VHELDPNTNV NSQPSDTKGI 
DHRPNGNEVV IMSEDDRTSS FFSQPGILAA VIGGAVVGLL CAILVVMFIV YRMRKKDEGS 
YALDEPKRSP ANNSYAKNAN NREFYA

Genular Protein ID: 1818566083

Symbol: B7YZM9_DROME

Name: N/A

UniProtKB Accession Codes:

B7YZM9

Database IDs:

AGR 1 ARBA 8 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 4 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 1 GeneTree 1 GenomeRNAi 1 InterPro 4 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PROSITE 1 PeptideAtlas 1 Pfam 1 Proteomes 2 RefSeq 1 RuleBase 1 SAM 3 SMART 2 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

PubMed ID: 26109357

Title: Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

PubMed ID: 26109357

DOI: .1534/g3.115.018929

PubMed ID: 26109356

Title: Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

PubMed ID: 26109356

DOI: .1534/g3.115.018937

PubMed ID: 25589440

Title: The Release 6 reference sequence of the Drosophila melanogaster genome.

PubMed ID: 25589440

Sequence Information:

  • Length: 398
  • Mass: 42017
  • Checksum: 90227B74756605BF
  • Sequence:
    • MKPKQKISVE PLLLVAILIG VLVAATHAQD QKSVKPSAAA PSAAASRPHD EIYIDDDSIE 
GSGGRGGIHE DLEKDPDYSG SGFGPDDEDA EPDQHSHSSH NTRISQSSNS GINTHTPTQT 
SSTIPTTSTS TPMPTTTPTA TTPASTTTAA ATQISSFANS SSTTTTTLAP TIPAEPQQPL 
FPPFDKDLDT ESSGDGIDAD AEDDDEDDGD DKDYDYNKEL DKEIDIDGPE PGHLPPVVHH 
NTVETGHIPT TDEIDVDGGD EDDNGDSDID GPRIGGNDGD ITERGPGAGG SNVHELDPNT 
NVNSQPSDTK GIDHRPNGNE VVIMSEDDRT SSFFSQPGIL AAVIGGAVVG LLCAILVVMF 
IVYRMRKKDE GSYALDEPKR SPANNSYAKN ANNREFYA

Genular Protein ID: 4170101797

Symbol: A0A0B4K862_DROME

Name: N/A

UniProtKB Accession Codes:

A0A0B4K862

Database IDs:

AGR 1 ARBA 8 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 1 GeneTree 1 GenomeRNAi 1 InterPro 4 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PROSITE 1 Pfam 1 Proteomes 2 RefSeq 1 RuleBase 1 SAM 2 SMART 2 SMR 1 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 75
  • Mass: 8265
  • Checksum: 677AD56D36EBBDE3
  • Sequence:
    • MSEDDRTSSF FSQPGILAAV IGGAVVGLLC AILVVMFIVY RMRKKDEGSY ALDEPKRSPA 
NNSYAKNANN REFYA

Genular Protein ID: 1685556310

Symbol: E1JGQ9_DROME

Name: N/A

UniProtKB Accession Codes:

E1JGQ9

Database IDs:

AGR 1 ARBA 8 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CTD 1 ChiTaRS 1 DNASU 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 1 GeneTree 1 Genevisible 1 GenomeRNAi 1 InterPro 4 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PROSITE 1 PaxDb 1 PeptideAtlas 1 Pfam 1 Proteomes 2 RefSeq 1 RuleBase 1 SAM 3 SMART 2 SMR 1 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 495
  • Mass: 52257
  • Checksum: 82E16BC802CF0FCC
  • Sequence:
    • MKPKQKISVE PLLLVAILIG VLVAATHAQD QKSVKPSAAA PSAAASRPHD EIYIDDDSIE 
GSGGRGGIHE DLEKDPDYSG SGFGPDDEDA EPDQHSHSSH NTRISQSSNS GINSKHNSNE 
NYGKNSKNSN SDLISSRFNN NNNHNQIDNS QNINLNPNNN HQTNSGTIIG SSTTANNNNN 
HNININSQNG IISGSGSDIG GHSTGINSIA AHTPTQTSST IPTTSTSTPM PTTTPTATTP 
ASTTTAAATQ ISSFANSSST TTTTLAPTIP AEPQQPLFPP FDKDLDTESS GDGIDADAED 
DDEDDGDDKD YDYNKELDKE IDIDGPEPGH LPPVVHHNTV ETGHIPTTDE IDVDGGDEDD 
NGDSDIDGPR IGGNDGDITE RGPGAGGSNV HELDPNTNVN SQPSDTKGID HRPNGNEVVI 
MSEDDRTSSF FSQPGILAAV IGGAVVGLLC AILVVMFIVY RMRKKDEGSY ALDEPKRSPA 
NNSYAKNANN REFYA

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.