Ssrp | FBgn0010278 | NCBI 37767

Details for: Ssrp

Gene ID: 37767

Symbol: Ssrp

Ensembl ID: FBgn0010278

Description: Structure specific recognition protein

Associated with

Formation of rna pol ii elongation complex
(R-DME-112382)
Gene expression (transcription)
(R-DME-74160)
Generic transcription pathway
(R-DME-212436)
Regulation of tp53 activity
(R-DME-5633007)
Regulation of tp53 activity through phosphorylation
(R-DME-6804756)
Rna polymerase ii pre-transcription events
(R-DME-674695)
Rna polymerase ii transcription
(R-DME-73857)
Rna polymerase ii transcription elongation
(R-DME-75955)
Tp53 regulates transcription of dna repair genes
(R-DME-6796648)
Transcriptional regulation by tp53
(R-DME-3700989)
Chromo shadow domain binding
(GO:0070087)
Cytosol
(GO:0005829)
Dna binding
(GO:0003677)
Fact complex
(GO:0035101)
Follicle cell of egg chamber development
(GO:0030707)
Histone binding
(GO:0042393)
Negative regulation of protein phosphorylation
(GO:0001933)
Nucleolus
(GO:0005730)
Nucleosomal dna binding
(GO:0031492)
Nucleosome binding
(GO:0031491)
Nucleus
(GO:0005634)
Polytene chromosome interband
(GO:0005705)
Polytene chromosome puff
(GO:0005703)
Positive regulation of actin filament polymerization
(GO:0030838)
Protein binding
(GO:0005515)
Protein heterodimerization activity
(GO:0046982)
Regulation of chromatin organization
(GO:1902275)

Other Information

Proteins

FACT complex subunit Ssrp1

Genular Protein ID: 2688050571

Symbol: SSRP1_DROME

Name: FACT complex subunit Ssrp1

UniProtKB Accession Codes:

Q05344 Q86NM5 Q9W1J4

Database IDs:

Citations:

PubMed ID: 7688122

Title: A Drosophila single-strand DNA/RNA-binding factor contains a high-mobility-group box and is enriched in the nucleolus.

PubMed ID: 7688122

DOI: 10.1073/pnas.90.14.6488

PubMed ID: 8479916

Title: Isolation and characterization of cDNA clones encoding the Drosophila homolog of the HMG-box SSRP family that recognizes specific DNA structures.

PubMed ID: 8479916

DOI: 10.1093/nar/21.7.1643

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12815073

Title: Drosophila FACT contributes to Hox gene expression through physical and functional interactions with GAGA factor.

PubMed ID: 12815073

DOI: 10.1101/gad.1086803

PubMed ID: 10199952

Title: CHD1 interacts with SSRP1 and depends on both its chromodomain and its ATPase/helicase-like domain for proper association with chromatin.

PubMed ID: 10199952

DOI: 10.1007/s004120050347

PubMed ID: 12934007

Title: Tracking FACT and the RNA polymerase II elongation complex through chromatin in vivo.

PubMed ID: 12934007

DOI: 10.1126/science.1085712

PubMed ID: 17372656

Title: An integrated chemical, mass spectrometric and computational strategy for (quantitative) phosphoproteomics: application to Drosophila melanogaster Kc167 cells.

PubMed ID: 17372656

DOI: 10.1039/b617545g

PubMed ID: 18327897

Title: Phosphoproteome analysis of Drosophila melanogaster embryos.

PubMed ID: 18327897

DOI: 10.1021/pr700696a

PubMed ID: 16041486

Title: Solution structure of the HMG-box domain in the SSRP1 subunit of FACT.

PubMed ID: 16041486

DOI: 10.1007/s10858-005-3662-3

Sequence Information:

Length: 723
Mass: 81533
Checksum: DE8017F75C6CA207
Sequence:

MTDSLEYNDI NAEVRGVLCS GRLKMTEQNI IFKNTKTGKV EQISAEDIDL INSQKFVGTW 
GLRVFTKGGV LHRFTGFRDS EHEKLGKFIK AAYSQEMVEK EMCVKGWNWG TARFMGSVLS 
FDKESKTIFE VPLSHVSQCV TGKNEVTLEF HQNDDAPVGL LEMRFHIPAV ESAEEDPVDK 
FHQNVMSKAS VISASGESIA IFREIQILTP RGRYDIKIFS TFFQLHGKTF DYKIPMDSVL 
RLFMLPHKDS RQMFFVLSLD PPIKQGQTRY HYLVLLFAPD EETTIELPFS EAELRDKYEG 
KLEKEISGPV YEVMGKVMKV LIGRKITGPG NFIGHSGTAA VGCSFKAAAG YLYPLERGFI 
YIHKPPLHIR FEEISSVNFA RSGGSTRSFD FEVTLKNGTV HIFSSIEKEE YAKLFDYITQ 
KKLHVSNMGK DKSGYKDVDF GDSDNENEPD AYLARLKAEA REKEEDDDDG DSDEESTDED 
FKPNENESDV AEEYDSNVES DSDDDSDASG GGGDSDGAKK KKEKKSEKKE KKEKKHKEKE 
RTKKPSKKKK DSGKPKRATT AFMLWLNDTR ESIKRENPGI KVTEIAKKGG EMWKELKDKS 
KWEDAAAKDK QRYHDEMRNY KPEAGGDSDN EKGGKSSKKR KTEPSPSKKA NTSGSGFKSK 
EYISDDDSTS SDDEKDNEPA KKKSKPPSDG DAKKKKAKSE SEPEESEEDS NASDEDEEDE 
ASD

The gene details are incomplete or unavailable at the moment.

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.

Details for: Ssrp

Associated with

Other Information

A Drosophila single-strand DNA/RNA-binding factor contains a high-mobility-group box and is enriched in the nucleolus. PubMed ID: 7688122

Isolation and characterization of cDNA clones encoding the Drosophila homolog of the HMG-box SSRP family that recognizes specific DNA structures. PubMed ID: 8479916

The genome sequence of Drosophila melanogaster. PubMed ID: 10731132

Annotation of the Drosophila melanogaster euchromatic genome: a systematic review. PubMed ID: 12537572

Drosophila FACT contributes to Hox gene expression through physical and functional interactions with GAGA factor. PubMed ID: 12815073

CHD1 interacts with SSRP1 and depends on both its chromodomain and its ATPase/helicase-like domain for proper association with chromatin. PubMed ID: 10199952

Tracking FACT and the RNA polymerase II elongation complex through chromatin in vivo. PubMed ID: 12934007

An integrated chemical, mass spectrometric and computational strategy for (quantitative) phosphoproteomics: application to Drosophila melanogaster Kc167 cells. PubMed ID: 17372656

Phosphoproteome analysis of Drosophila melanogaster embryos. PubMed ID: 18327897

Solution structure of the HMG-box domain in the SSRP1 subunit of FACT. PubMed ID: 16041486