Details for: TfIIEbeta

Gene ID: 38527

Symbol: TfIIEbeta

Ensembl ID: FBgn0015829

Description: Transcription factor IIEbeta

Associated with

  • Gene expression (transcription)
    (R-DME-74160)
  • Rna polymerase ii pre-transcription events
    (R-DME-674695)
  • Rna polymerase ii promoter escape
    (R-DME-73776)
  • Rna polymerase ii transcribes snrna genes
    (R-DME-6807505)
  • Rna polymerase ii transcription
    (R-DME-73857)
  • Rna polymerase ii transcription initiation
    (R-DME-75953)
  • Rna polymerase ii transcription initiation and promoter clearance
    (R-DME-76042)
  • Rna polymerase ii transcription pre-initiation and promoter opening
    (R-DME-73779)
  • Mrna transcription by rna polymerase ii
    (GO:0042789)
  • Nucleus
    (GO:0005634)
  • Tfiih-class transcription factor complex binding
    (GO:0001097)
  • Transcription factor tfiie complex
    (GO:0005673)
  • Transcription initiation at rna polymerase ii promoter
    (GO:0006367)

Other Information

Genular Protein ID: 2312795640

Symbol: E1JIC9_DROME

Name: N/A

UniProtKB Accession Codes:

E1JIC9

Database IDs:

AGR 1 ARBA 5 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 DNASU 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 5 Gene3D 1 GeneTree 1 Genevisible 1 GenomeRNAi 1 HOGENOM 1 InterPro 5 KEGG 1 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PIRNR 1 PIRSF 1 PROSITE 2 PeptideAtlas 1 Pfam 2 Proteomes 2 RefSeq 1 SMR 1 SUPFAM 1 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 249
  • Mass: 28506
  • Checksum: 6887D02B16403801
  • Sequence:
    • MRPPNAPRLD ATTYKTMSGS SQYRFGVLAK IVKFMRTRHQ DGDDHPLTID EILDETNQLD 
IGQSVKNWLA SEALHNNPKV EASPCGTKFS FKPVYKIKDG KTLMRLLKQH DLKGLGGILL 
DDVQESLPHC EKVLKNRSAE ILFVVRPIDK KKILFYNDRT ANFSVDDEFQ KLWRSATVDA 
MDDAKIDEYL EKQGIRSMQD HGLKKAIPKR KKAANKKRQF KKPRDNEHLA DVLEVYEDNT 
LTLKGVNPT

Genular Protein ID: 2216188029

Symbol: O96881_DROME

Name: N/A

UniProtKB Accession Codes:

O96881

Database IDs:

AGR 1 ARBA 5 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CDD 1 CTD 1 ComplexPortal 1 DNASU 1 EMBL 6 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 5 Gene3D 1 GeneTree 1 GenomeRNAi 1 InParanoid 1 IntAct 1 InterPro 5 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PIRNR 1 PIRSF 1 PROSITE 2 PaxDb 1 PeptideAtlas 1 Pfam 2 Proteomes 2 Reactome 6 RefSeq 1 SAM 1 SMR 1 STRING 1 SUPFAM 1 UCSC 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 9012800

Title: Drosophila TFIIE: purification, cloning, and functional reconstitution.

PubMed ID: 9012800

DOI: 10.1073/pnas.94.2.433

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

PubMed ID: 26109357

Title: Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

PubMed ID: 26109357

DOI: .1534/g3.115.018929

PubMed ID: 26109356

Title: Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

PubMed ID: 26109356

DOI: .1534/g3.115.018937

PubMed ID: 25589440

Title: The Release 6 reference sequence of the Drosophila melanogaster genome.

PubMed ID: 25589440

Sequence Information:

  • Length: 292
  • Mass: 33390
  • Checksum: 2E185AACCD4F7BD2
  • Sequence:
    • MDPALLRERE AFKKRAMATP TVEKKSKPDR PAPPPPSDDS RRKMRPPNAP RLDATTYKTM 
SGSSQYRFGV LAKIVKFMRT RHQDGDDHPL TIDEILDETN QLDIGQSVKN WLASEALHNN 
PKVEASPCGT KFSFKPVYKI KDGKTLMRLL KQHDLKGLGG ILLDDVQESL PHCEKVLKNR 
SAEILFVVRP IDKKKILFYN DRTANFSVDD EFQKLWRSAT VDAMDDAKID EYLEKQGIRS 
MQDHGLKKAI PKRKKAANKK RQFKKPRDNE HLADVLEVYE DNTLTLKGVN PT

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.