Details for: Lmx1a

Gene ID: 39406

Symbol: Lmx1a

Ensembl ID: FBgn0052105

Description: LIM homeobox transcription factor 1 alpha

Associated with

  • Dna-binding transcription factor activity, rna polymerase ii-specific
    (GO:0000981)
  • Dna binding
    (GO:0003677)
  • Neuron differentiation
    (GO:0030182)
  • Nucleus
    (GO:0005634)
  • Regulation of dna-templated transcription
    (GO:0006355)
  • Regulation of transcription by rna polymerase ii
    (GO:0006357)
  • Rna polymerase ii transcription regulatory region sequence-specific dna binding
    (GO:0000977)

Other Information

Genular Protein ID: 1856554510

Symbol: Q9VTW5_DROME

Name: N/A

UniProtKB Accession Codes:

Q9VTW5

Database IDs:

AGR 1 ARBA 8 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CDD 2 CTD 1 DNASU 1 EMBL 4 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 6 Gene3D 2 GeneTree 1 HOGENOM 1 InParanoid 1 IntAct 1 InterPro 5 NCBI Taxonomy 1 OMA 1 OrthoDB 1 PANTHER 2 PROSITE 6 PROSITE-ProRule 2 PaxDb 1 Pfam 2 Proteomes 2 RefSeq 1 RuleBase 1 SAM 1 SMART 2 SMR 1 STRING 1 SUPFAM 2 UCSC 1 VEuPathDB 1 eggNOG 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

PubMed ID: 26109357

Title: Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

PubMed ID: 26109357

DOI: .1534/g3.115.018929

PubMed ID: 26109356

Title: Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

PubMed ID: 26109356

DOI: .1534/g3.115.018937

PubMed ID: 25589440

Title: The Release 6 reference sequence of the Drosophila melanogaster genome.

PubMed ID: 25589440

Sequence Information:

  • Length: 640
  • Mass: 67760
  • Checksum: A1A10F826018C98E
  • Sequence:
    • MLEFYPMPTN LNPVGGSLYS LQQNHGGARF LDNPNPGSMT ASSGNSLHLS NSNNNLPTSI 
SGNNSPTATA SLTGQHQQHQ QQQHQQQQQH PHQQHQQHQQ QHAASTTPVP INSCPTPTGH 
SPLSSSSSNS NHNNNNNNNN GGSSSNNLHS ACNTLTAAAV AAASAAAVAA PSPAGTSVAT 
SQLGGAVAAA IAAAAAAAAA ATTPTSTGPA ATGSGNANGS GNGNGNGNGN GNGNGNGNGG 
GAATASAAAA SKLSADCSGR TEVGHIKCEK NFELCEGCGQ KIHDRFLMNV GDANWHEQCL 
ACCYCGMQLH HTCYVRNSKL YCKMDYDRLF GVKCSSCCHA ILPQELVMRP IPNFVFHLPC 
FVCYACRLPL QKGEQFMLRD GQLFCYRHDL EKEMFLAAAA AQHCGFVGLD EEDLLRPRDG 
RRGPKRPRTI LTSQQRKQFK ASFDQSPKPC RKVREALAKD TGLSVRVVQV WFQNQRAKMK 
KIQRKAKQNG GSGGGSGSGR GTGNSSATDD KDTNDKEDKC VKQELGGDSS GYLGGLDSTF 
ASQPLNPNLP FSPDDYPANS NDSFCSSDLS LDGSNFDQLD DDADSLSLNN LELQSTSSSG 
NQHSHSHSNP HDMLANLNNS LINPIDKLYL MQNSYFSSEH

Genular Protein ID: 3839412183

Symbol: M9PCA3_DROME

Name: N/A

UniProtKB Accession Codes:

M9PCA3

Database IDs:

AGR 1 ARBA 8 AlphaFoldDB 1 Bgee 1 BioGRID-ORCS 1 CDD 2 CTD 1 DNASU 1 EMBL 2 EnsemblMetazoa 1 ExpressionAtlas 1 FlyBase 2 GO 6 Gene3D 2 GeneTree 1 InterPro 5 KEGG 1 NCBI Taxonomy 1 OrthoDB 1 PANTHER 2 PROSITE 6 PROSITE-ProRule 2 Pfam 2 Proteomes 2 RefSeq 1 RuleBase 1 SAM 1 SMART 2 SMR 1 SUPFAM 2 VEuPathDB 1

Citations:

PubMed ID: 10731132

Title: The genome sequence of Drosophila melanogaster.

PubMed ID: 10731132

DOI: 10.1126/science.287.5461.2185

PubMed ID: 12537568

Title: Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.

PubMed ID: 12537568

PubMed ID: 12537572

Title: Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

PubMed ID: 12537572

DOI: 10.1186/gb-2002-3-12-research0083

PubMed ID: 12537573

Title: The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.

PubMed ID: 12537573

PubMed ID: 12537574

Title: Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.

PubMed ID: 12537574

PubMed ID: 16110336

Title: Combined evidence annotation of transposable elements in genome sequences.

PubMed ID: 16110336

DOI: 10.1371/journal.pcbi.0010022

PubMed ID: 17569856

Title: The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

PubMed ID: 17569856

DOI: 10.1126/science.1139815

PubMed ID: 17569867

Title: Sequence finishing and mapping of Drosophila melanogaster heterochromatin.

PubMed ID: 17569867

DOI: 10.1126/science.1139816

Sequence Information:

  • Length: 639
  • Mass: 67631
  • Checksum: E167E5C2B113EDF6
  • Sequence:
    • MLEFYPMPTN LNPVGGSLYS LQQNHGGARF LDNPNPGSMT ASSGNSLHLS NSNNNLPTSI 
SGNNSPTATA SLTGQHQQHQ QQQHQQQQQH PHQQHQQHQQ QHAASTTPVP INSCPTPTGH 
SPLSSSSSNS NHNNNNNNNN GGSSSNNLHS ACNTLTAAAV AAASAAAVAA PSPAGTSVAT 
SQLGGAVAAA IAAAAAAAAA ATTPTSTGPA ATGSGNANGS GNGNGNGNGN GNGNGNGNGG 
GAATASAAAA SKLSADCSGR TVGHIKCEKN FELCEGCGQK IHDRFLMNVG DANWHEQCLA 
CCYCGMQLHH TCYVRNSKLY CKMDYDRLFG VKCSSCCHAI LPQELVMRPI PNFVFHLPCF 
VCYACRLPLQ KGEQFMLRDG QLFCYRHDLE KEMFLAAAAA QHCGFVGLDE EDLLRPRDGR 
RGPKRPRTIL TSQQRKQFKA SFDQSPKPCR KVREALAKDT GLSVRVVQVW FQNQRAKMKK 
IQRKAKQNGG SGGGSGSGRG TGNSSATDDK DTNDKEDKCV KQELGGDSSG YLGGLDSTFA 
SQPLNPNLPF SPDDYPANSN DSFCSSDLSL DGSNFDQLDD DADSLSLNNL ELQSTSSSGN 
QHSHSHSNPH DMLANLNNSL INPIDKLYLM QNSYFSSEH

Database document:

This is a preview of the gene's schema. Only a few entries are kept for 'singleCellExpressions,' 'mRNAExpressions,' and other large data arrays for visualization purposes. You can zoom in with the mouse wheel for a closer view, and the text will adjust automatically if necessary. For the full schema, download it here.